Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02348 atggctctctttgctgcattttccatttgtaaagttgccaaggatgcagctggagttgcagGAAATGTCTTTGCTTTTGGGTTGTTTGTGTCTCCCATACCCACATTTAGGAGGATTATCAGAAATGGGTCAACAGAGATGTTCTCAGGGTTGCCATATATTTATTCCCTTCTAAACTGCTTGATCTGCATGTGGTATGGCACACCTCTGATATCTGCTGATAATTTGTTGGTTACAACTGTTAATTCAATTGGAGCTGTCTTTCAATTTGTGTACATAATCATCTTCCTGATGTATGCTGAGAAAGCAAAAAAGGTGAGAATGATTGGATTATCGCTGGCAGTTCTTGGCATATTTGCAATCATATTAGTTGGAAGCTTGCAAATAGATGACATTATAATGCGGCGGTTCTTTGTGGGATTCTTGAGCTGTGCCTCTCTCATTTCAATGTTTGCCTCTCCATTGTTTATAATTAAATTGGTCATTCAGACAAAGAGTGTTGAATTCATGCCGTTTTATCTCTCACTTTCCACCTTCCTAATGAGCACCTCTTTCTTACTTTATGGATTATTCAACGATGATGCCTTTATTTATGTGCCAAATGGGATAGGAACCATATTGGGATTGATACAGTTGATATTATACTTCTATTTCGAGGGTAAATCTAGAGTGAACTCCAGAGAACCTTTGATAAAAATGCAATCATCAATTGCGTTCTTTCCTCATATGTACGTATATGGAGGAGTTGTCAGAGTGCAATCACACTCACACACTAACTTTGTTCCAACAACAAACTCTGTTCCAAAAACCATTACCCCCAAACCCAACCACTTTACTTCAACTCAAATCAAATCAACTTATAGGATCACACTCAGATGCAATTCTCAACCTCAACCACTGCCAAACCTTTTTGCATCAAAATCACCAAGAGTCTCCGGTTCCAATGTTGCTCCACTTCGGTGCGGCATTTCTTCGAACGAGTACAGCGCAAATGAAGGTAGGAGTGTTGGGGAATGGCTTGTGCTGGCCGGTGAGGTCCTTTCGACGGGATTTCCATTGTGGGTCACAATTGCGTCTGTTTTGGGGTTGATGAAACCAAGTTACTTCAATTGGGTCACTCCCAAGTTGAGCATCATGGGTCTCAACATCATCATGCTGGGTATGGGTATGACTCTCACTCTTGATGATCTTCGTGGGGTTCTTGCTATGCCTAAGGAAGTCCTCTCTGGTTTTCTCATCCAGTATTCGGTGATGCCACTATCTGGATTTCTTATAAGCAAACTCCTAAATCTTCCATCACATTCTGCAGCAGGTATAATATTACTCGGGTGCTGTCCAGGAGGCACAGCTAGTAACATTATAACTTATCTTGCACGTGCAAATGTGGCGCTTTCTGTGATAATGACAACTGCAAGCACCATATCTGCCATGATAATGACTCCTTTACTGACAGCAAAACTTGCTGGTAAATATGTAGCAGTGGACGCACCAGGCTTATTGATTTCAACATTGCAAGTTGTGCTTGTTCCTGTGTTGGCTGGTGCATTTCTGAACCAGTTTTTCCAACCTATTGTTAAATTTGTGTCTCCATTGATGCCACCCATAGCTGTAATAACTGTGGCAATTTTGTGTGGAAATGCTATTGGCCAGAGTTCTTCAGCAATCCTTGCATCTGGTGGACAAGTGATTTTAGCCACCTTCCTTCTTCAGGCTTCTGGGTTTTTCTTTGGTTACCTATTTGCAAGATTGCTTAGGTTAGATGTGTCATCGTCACGAACCATATCCTCCCAGGTTGGCATGAAGAACTGTGTTCTCCAGATTGTTCTGGCTACGAAGCACTTTGGAGATCCCCTAAGTGCAGTACCTGGTGCTCTTGCAATTGTGAATCAGTCAATCATTGGTAGTATCCTTGCAGGAATTTGGAGACGCATTGTGCCTGTTTAA 1944 0.4043 MALFAAFSICKVAKDAAGVAGNVFAFGLFVSPIPTFRRIIRNGSTEMFSGLPYIYSLLNCLICMWYGTPLISADNLLVTTVNSIGAVFQFVYIIIFLMYAEKAKKVRMIGLSLAVLGIFAIILVGSLQIDDIIMRRFFVGFLSCASLISMFASPLFIIKLVIQTKSVEFMPFYLSLSTFLMSTSFLLYGLFNDDAFIYVPNGIGTILGLIQLILYFYFEGKSRVNSREPLIKMQSSIAFFPHMYVYGGVVRVQSHSHTNFVPTTNSVPKTITPKPNHFTSTQIKSTYRITLRCNSQPQPLPNLFASKSPRVSGSNVAPLRCGISSNEYSANEGRSVGEWLVLAGEVLSTGFPLWVTIASVLGLMKPSYFNWVTPKLSIMGLNIIMLGMGMTLTLDDLRGVLAMPKEVLSGFLIQYSVMPLSGFLISKLLNLPSHSAAGIILLGCCPGGTASNIITYLARANVALSVIMTTASTISAMIMTPLLTAKLAGKYVAVDAPGLLISTLQVVLVPVLAGAFLNQFFQPIVKFVSPLMPPIAVITVAILCGNAIGQSSSAILASGGQVILATFLLQASGFFFGYLFARLLRLDVSSSRTISSQVGMKNCVLQIVLATKHFGDPLSAVPGALAIVNQSIIGSILAGIWRRIVPV 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02348 647 Gene3D - 138 229 - -
Gma13g02348 647 Pfam Sodium Bile acid symporter family 379 551 IPR002657 GO:0016020
Gma13g02348 647 Gene3D - 11 105 - -
Gma13g02348 647 Gene3D - 339 644 IPR038770 -
Gma13g02348 647 PANTHER SODIUM/METABOLITE COTRANSPORTER BASS1, CHLOROPLASTIC-RELATED 277 646 - -
Gma13g02348 647 Pfam Sugar efflux transporter for intercellular exchange 138 221 IPR004316 GO:0016021
Gma13g02348 647 Pfam Sugar efflux transporter for intercellular exchange 18 103 IPR004316 GO:0016021
Gma13g02348 647 PANTHER SODIUM-BILE ACID COTRANSPORTER 277 646 IPR004710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02348 Gma-Chr13 38203275 38212490 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02348 320 646 Organic Solute Cotransporters AT1G78560 70.031 2.20e-163 472
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02348 K03453 - gmx:100788854 795.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02348 13 38203275 38212490 Gma13g02348 13 38203275 38212490 ECH