Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02340 ATGTCTCTTAAACTTTGCTATCGCTCAATCCAAGGACGAGGATATTGCAGACTTTCAGGGAAAGTAAACCTTGAAACAATCATGAGCATCGGAACAACACTACTTTCAACACCACCACATTACTGTTTCCACTCCAACACTCAAACCACATTCCTCAGCACCGTTACTCCAATTCAAAACCTCTCTATCCGCAATAACAATTTCAGAGTCCTCTGTTTCTCTTCGGACCCGTCGCAGTTGCCGCCGGTGGTGGTGGTGGGGTCCGCCAACGCCGACATCTACGTCGAGGTAGACCGGCTCCCGGGCGAGGGCGAGACCCTGGCGGCGAGGTCCGGGCAGACGATTGCCGGCGGCAAGGGCGCCAACCAGGCCACGTGCTCCGCCAAGCTCGCGTACCCGACCTACTTCGTCGGGCAGGTCGGGGACGACGCTTACGGGAGACTCGTCACGGCGGGCCTCCGCGGTGGCGGGGTTCGCCTCGATAATCTCGCCGTGGTGGCTTCGGCGGCAACGGGTCATGCAGTTGTGATGCTCCAGTCCAACGGCCAGAACTCCATCGTCTACATTGGGGGTGCCAACTTGAGCTGCTGGCCTAGTTCCCTGCCACGTCAGCATTTGGACCTCGTTGCCCAAGCTGGCATCGTTTTGCTGCAGAGGGAGATTCCTGATGCTGTCAATGCTCAAGTCGCACAGGCTGCCAAAAATGCTGGGGTGCCAGTAGTGTTGGATGCTGGAGGCATGGATGGGCCACTTCCGCCACAATTAATAAATTTTGTTGATATTTTGAGTCCTAATGAAACTGAACTTGCACGCCTTACGGGAATGCCAACAGAAAGTTTTGAAGAGATTCAACAGGCTGCTTTGAAATGCCATGAAATGGGAGCTAAGCAAGTTCTTGTGAAACTTGGACACAAAGGATCTGCCCTTTTTGTAGAAGGAGAAAAAACAATTCAGCAGCCTGCCATACTTGCTAAAACAGTTGTTGATACAACTGGTGCTGGTGATACTTTTACTGCTGCTTTTGCCGTGGCCTTGGTTGAGGGCAAGTCCAAAAAGGAATGCCTCAGATTTGCCGCTGCTGCAGCTTGTCTCTGTGTTCAAGTGAAGGGAGCCTCTCCCAGCATGCCTGATAGGAAATCTGTTTTGGATCTTCTTAATTGTCAATGA 1167 0.5244 MSLKLCYRSIQGRGYCRLSGKVNLETIMSIGTTLLSTPPHYCFHSNTQTTFLSTVTPIQNLSIRNNNFRVLCFSSDPSQLPPVVVVGSANADIYVEVDRLPGEGETLAARSGQTIAGGKGANQATCSAKLAYPTYFVGQVGDDAYGRLVTAGLRGGGVRLDNLAVVASAATGHAVVMLQSNGQNSIVYIGGANLSCWPSSLPRQHLDLVAQAGIVLLQREIPDAVNAQVAQAAKNAGVPVVLDAGGMDGPLPPQLINFVDILSPNETELARLTGMPTESFEEIQQAALKCHEMGAKQVLVKLGHKGSALFVEGEKTIQQPAILAKTVVDTTGAGDTFTAAFAVALVEGKSKKECLRFAAAAACLCVQVKGASPSMPDRKSVLDLLNCQ 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02340 388 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 329 342 IPR002173 GO:0016773
Gma13g02340 388 Gene3D - 80 387 IPR029056 -
Gma13g02340 388 PRINTS Ribokinase signature 85 106 IPR002139 GO:0016301
Gma13g02340 388 PRINTS Ribokinase signature 112 131 IPR002139 GO:0016301
Gma13g02340 388 PRINTS Ribokinase signature 184 197 IPR002139 GO:0016301
Gma13g02340 388 PRINTS Ribokinase signature 254 269 IPR002139 GO:0016301
Gma13g02340 388 PRINTS Ribokinase signature 298 309 IPR002139 GO:0016301
Gma13g02340 388 CDD ribokinase 82 377 IPR011877 GO:0004747|GO:0006014
Gma13g02340 388 Hamap Ribokinase [rbsK]. 81 383 IPR011877 GO:0004747|GO:0006014
Gma13g02340 388 PANTHER SUGAR KINASE 81 386 - -
Gma13g02340 388 SUPERFAMILY Ribokinase-like 82 385 IPR029056 -
Gma13g02340 388 Pfam pfkB family carbohydrate kinase 83 377 IPR011611 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02340 Gma-Chr13 38138855 38141980 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02340 K00852 - gmx:100787958 672.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02340 13 38138855 38141980 Gma13g02340 13 38138855 38141980 ECH