Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02327 ATGATGTCTGTCACAGGCAAAAGCATTGATTTTGCTGGCAAAAACTTGGTCTCTTGTGGCTGCTCTTCCAATGCTTCTTCGTTTGATAGGTACACTGTGAGGAACTATGCCAAGCTGAATAGTAATAATTCTAAAGGGTGTGGCAGAGATCATGGGGCTCGTAAATTGGTTTGTTGTAAGAAGAGGAGCACTCATTGTCGGGTTTCTTCTATGAAGACTGCACAGCCTACGGTGAATGGGGGGACTCATGCATTTGAAGGCCTTACCACAGGATTGGACTTGAAGGGTTATTCAGAAGACCCCATTTCCCCTGCTAGGCTTTTTGAAGTGGTTGCCGATGATCTGCTAACTCTCAATAAAAATCTTCAGTCGATTGTAGGAGCAGAAAATCCAGTTTTGATGTCTGCAGCTGAGCAGATTTTTAGTGCTGGTGGAAAGAGGATGAGACCAGCTTTGGTGTTCTTGGTGTCAAGGGCGACTGCAGAGTTACTTGGCTTGAAGGAACTTACTGCAAAGCATCGACGTTTAGCAGAGATAATTGAAATGATTCATACTGCAAGTTTGATACATGATGATGTACTAGATGAGAGTGACCTTCGACGAGGGAAGAAAACTGTTCATCAAATGTTTGGAACAAGAGTTGCAGTGCTGGCTGGAGACTTCATGTTTGCACAGTCATCATGGTATCTAGCCAACCTTGAAAATATTCAAGTCATTAAACTCATCAGTCAGGTGATAAAAGATTTTGCAAGTGGGGAAATAAAGCAGGCTTCAAGCTTGTTTGATTGTGATGTACAACTTGACGAGTATCTAATTAAGAGCTATTACAAGACAGCATCCTTGATTGCTGCCAGCACAAAAGGAGCCGCGATCTTTAGTGGTGCTGACAGCAGCGTGACTGAGAAAATGTACGAATATGGAAGGAATCTTGGTCTATCCTTCCAAGTTGTGGATGACATATTGGATTTCACTCAATCAGCCGAGCAACTGGGAAAGCCTGCTGGCAGTGACCTTGCCAAGGGCAACCTGACTGCACCAGTAATTTTCGCACTGGAGAAAGAACCGAAATTGAGGGATATCATCGAGTCTGAATTCAGTGAGGTTGGTTCCCTTGAGGAAGCCATCAATTTGGTCAAGAGTTGTGGGGGCATTGAAAGAGCACAAGAGTTAGCAAAAGAGAAAGCCGATCTTGCAATTCAAAGTCTCCAATGCCTACCTCAGAGTGTATTTCGTTTAGCCCTTGAAGATATGGTGGCATATAACCTTCAACGGATTGCATAA 1281 0.4364 MMSVTGKSIDFAGKNLVSCGCSSNASSFDRYTVRNYAKLNSNNSKGCGRDHGARKLVCCKKRSTHCRVSSMKTAQPTVNGGTHAFEGLTTGLDLKGYSEDPISPARLFEVVADDLLTLNKNLQSIVGAENPVLMSAAEQIFSAGGKRMRPALVFLVSRATAELLGLKELTAKHRRLAEIIEMIHTASLIHDDVLDESDLRRGKKTVHQMFGTRVAVLAGDFMFAQSSWYLANLENIQVIKLISQVIKDFASGEIKQASSLFDCDVQLDEYLIKSYYKTASLIAASTKGAAIFSGADSSVTEKMYEYGRNLGLSFQVVDDILDFTQSAEQLGKPAGSDLAKGNLTAPVIFALEKEPKLRDIIESEFSEVGSLEEAINLVKSCGGIERAQELAKEKADLAIQSLQCLPQSVFRLALEDMVAYNLQRIA 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02327 426 ProSitePatterns Polyprenyl synthases signature 2. 310 322 IPR033749 -
Gma13g02327 426 Pfam Polyprenyl synthetase 132 377 IPR000092 GO:0008299
Gma13g02327 426 SFLD Isoprenoid Synthase Type I 136 419 - -
Gma13g02327 426 CDD Trans_IPPS_HT 128 424 IPR000092 GO:0008299
Gma13g02327 426 PANTHER SOLANESYL DIPHOSPHATE SYNTHASE 2 CHLOROPLASTIC 18 425 - -
Gma13g02327 426 ProSitePatterns Polyprenyl synthases signature 1. 188 202 IPR033749 -
Gma13g02327 426 SUPERFAMILY Terpenoid synthases 106 424 IPR008949 -
Gma13g02327 426 Gene3D Farnesyl Diphosphate Synthase 103 425 IPR008949 -
Gma13g02327 426 TIGRFAM prenyl_cyano: solanesyl diphosphate synthase 103 425 - -
Gma13g02327 426 PANTHER GERANYLGERANYL PYROPHOSPHATE SYNTHASE 18 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02327 Gma-Chr13 38057965 38062502 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02327 K05356 - gmx:100783538 827.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02327 13 38057965 38062502 Gma13g02327 13 38057965 38062502 ECH