Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02273 ATGGCCTCCTTGCTCCGCTCTCTCCGCCGCCGTGATGTCGCTTCCGCCTCCCTCTCCGCCTATCGCTCGTTAACGGGCAGCACCAAGCCAGCATATGTAGCTCACAACTGGTCTAGTTTGTCTCGACCATTCAGTTCAAGGCCTGCTGGAAACGATGTCATTGGTATTGATTTGGGTACTACCAATTCATGTGTTTCCGTTATGGAAGGAAAGAACCCCAAAGTCATTGAGAATTCTGAAGGtgcacgaacaacaccatctgtggttgctttcaaccagaaaggggagctgcttgtaggtaccccagctaagcgtcaagctgtaactaacccaacaaacactctctttggtaccaagcggttgattggtaggcgctttgatgacgctcaaacacaaaaggagatgaaaatggttccattcaagattgttaaggctccaaatggagatgcgtgggtggaagccaatgggcagcagtattcccctagtcaaattggtgcctttgttctcaccaagatgaaggaaactgcagaagcttatctaggaaagTCAATTTCTAAGGCTGTAATTACTGTACCAGCTTACTTCAATGATGCTCAGAGGCAGGCAACAAAAGATGCTGGTAGAATTGCAGGTCTTGACGTGCAGAGAATTATCAATGAGCCCACTGCTGCTGCACTTTCATATGGGATGAACAACAAGGAGGGTCTCATTGCCGTTTTTGACCTTGGAGGTGGAACATTTGATGTGTCCATCTTAGAAATTTCTAATGGTGTTTTTGAGGTGAAAGCAACAAATGGTGACACTTTCTTGGGAGGAGAGGATTTTGACAATGCCTTATTGGATTTTCTGGTGAATGAATTCAAAAGAACCGAGAGTATCGACCTTTCAAAGGACAGGCTTGCACTGCAGAGGCTTCGTGAAGCTGCTGAGAAAGCTAAGATCGAGCTGTCTTCAACATCTCAAACTGAGATCAACCTGCCTTTCATCACTGCTGATGCATCTGGTGCTAAGCATCTGAACATAACATTGACTAGATCGAAGTTTGAGGCTTTGGTGAATCACTTGATTGAAAGGACCAAGGTACCATGTAAAAGCTGCTTGAAGGATGCTAACATCTCTATCAAGGATGTTGATGAGGTTCTTCTAGTTGGAGGGATGACTCGTGTTCCTAAAGTCCAAGAGGTGGTTTCAGAGATCTTTGGAAAGTCTCCTAGTAAAGGAGTAAACCCTGATGAGGCAGTTGCCATGGGGGCGGCAATCCAAGGTGGTATTCTACGGGGAGATGTTAAAGAGCTACTACTCCTAGATGTAACACCACTCTCTCTGGGTATTGAGACTTTGGGTGGTATCTTTACAAGATTGATCAACCGCAACACTACTATTCCTACAAAGAAGAGTCAGGTCTTTTCAACAGCAGCTGACAATCAAACTCAGGTAGGTATCAAGGTGCTACAAGGTGAGCGGGAAATGGCTGCAGACAACAAAATGCTTGGAGAGTTTGACCTTGTTGGTATTCCTCCTGCTCCCAGAGGTCTGCCTCAGATTGAGGTCACATTTGACATTGATGCTAATGGGATTGTTACTGTCTCTGCCAAAGACAAGTCCACTGGTAAAGAACAACAAATAACTATTCGGTCATCCGGTGGACTCTCGGATGATGAGATTGAAAAGATGGTCAAAGAAGCAGAATTGCATGCTCAGAAAGACCAAGAGAGAAAGGCTCTCATTGACATTAGAAACAGTGCTGACACTACCATCTATAGCATTGAGAAGAGTTTAGGTGAATACAGAGAGAAGATTCCCAGTGAAGTGGCCAAAGAAATTGAGGATGCAGTTTCGGATTTGAGACAGGCGATGTCAGGGGATAATGTTGATGAAATCAAGTCAAAGCTTGATGCTGCAAACAAAGCTGTGTCCAAGATTGGAGAGCACATGTCAGGTGGTTCTAGTGGCGGTTCCTCAGCTGGTGGTTCTCAGGGTGGGGATCAGGCTCCTGAGGCAGAATATGAGGAGGTGAAGAAGTAA 2025 0.3847 MASLLRSLRRRDVASASLSAYRSLTGSTKPAYVAHNWSSLSRPFSSRPAGNDVIGIDLGTTNSCVSVMEGKNPKVIENSEGARTTPSVVAFNQKGELLVGTPAKRQAVTNPTNTLFGTKRLIGRRFDDAQTQKEMKMVPFKIVKAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAEAYLGKSISKAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYGMNNKEGLIAVFDLGGGTFDVSILEISNGVFEVKATNGDTFLGGEDFDNALLDFLVNEFKRTESIDLSKDRLALQRLREAAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSKFEALVNHLIERTKVPCKSCLKDANISIKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVAMGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMAADNKMLGEFDLVGIPPAPRGLPQIEVTFDIDANGIVTVSAKDKSTGKEQQITIRSSGGLSDDEIEKMVKEAELHAQKDQERKALIDIRNSADTTIYSIEKSLGEYREKIPSEVAKEIEDAVSDLRQAMSGDNVDEIKSKLDAANKAVSKIGEHMSGGSSGGSSAGGSQGGDQAPEAEYEEVKK 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02273 674 Gene3D - 229 409 - -
Gma13g02273 674 PANTHER HEAT SHOCK 70 KDA PROTEIN, MITOCHONDRIAL 36 656 - -
Gma13g02273 674 SUPERFAMILY Actin-like ATPase domain 234 425 IPR043129 -
Gma13g02273 674 Pfam Hsp70 protein 53 645 IPR013126 GO:0005524|GO:0140662
Gma13g02273 674 Gene3D Actin; Chain A, domain 4 272 359 - -
Gma13g02273 674 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 425 549 IPR029047 -
Gma13g02273 674 PANTHER HEAT SHOCK PROTEIN 70KDA 36 656 IPR013126 GO:0005524|GO:0140662
Gma13g02273 674 ProSitePatterns Heat shock hsp70 proteins family signature 2. 239 252 IPR018181 -
Gma13g02273 674 MobiDBLite consensus disorder prediction 646 660 - -
Gma13g02273 674 PRINTS 70kDa heat shock protein signature 52 65 - -
Gma13g02273 674 PRINTS 70kDa heat shock protein signature 80 92 - -
Gma13g02273 674 PRINTS 70kDa heat shock protein signature 103 111 - -
Gma13g02273 674 PRINTS 70kDa heat shock protein signature 187 207 - -
Gma13g02273 674 PRINTS 70kDa heat shock protein signature 245 255 - -
Gma13g02273 674 PRINTS 70kDa heat shock protein signature 377 393 - -
Gma13g02273 674 PRINTS 70kDa heat shock protein signature 408 428 - -
Gma13g02273 674 PRINTS 70kDa heat shock protein signature 431 450 - -
Gma13g02273 674 PRINTS 70kDa heat shock protein signature 512 528 - -
Gma13g02273 674 ProSitePatterns Heat shock hsp70 proteins family signature 1. 56 63 IPR018181 -
Gma13g02273 674 Gene3D - 54 422 - -
Gma13g02273 674 SUPERFAMILY Actin-like ATPase domain 53 233 IPR043129 -
Gma13g02273 674 MobiDBLite consensus disorder prediction 638 674 - -
Gma13g02273 674 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 427 583 IPR029047 -
Gma13g02273 674 ProSitePatterns Heat shock hsp70 proteins family signature 3. 380 394 IPR018181 -
Gma13g02273 674 Gene3D - 550 647 IPR029048 -
Gma13g02273 674 CDD HSPA9-like_NBD 50 425 - -
Gma13g02273 674 Coils Coil 295 322 - -
Gma13g02273 674 TIGRFAM prok_dnaK: chaperone protein DnaK 53 645 IPR012725 GO:0005524|GO:0006457|GO:0051082
Gma13g02273 674 Hamap Chaperone protein DnaK [dnaK]. 50 672 IPR012725 GO:0005524|GO:0006457|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02273 Gma-Chr13 37532844 37536316 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02273 53 657 Miscellaneous Gene Families AT5G42020 50.872 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02273 K04043 - gmx:100804559 1280.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02273 13 37532844 37536316 Gma13g02273 13 37532844 37536316 ECH
Gma07g01791 07 39058465 39061713 Gma13g02273 13 37532844 37536316 PCT
Gma08g00618 08 5082305 5085562 Gma13g02273 13 37532844 37536316 PCT
Gma13g02273 13 37532844 37536316 Gma07g01791 07 39058465 39061713 PCT
Gma13g02273 13 37532844 37536316 Gma08g00618 08 5082305 5085562 PCT