Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02272 ATGGAACTAGCTCAGCATAGAGTTATGGAGAATGGGGTAGGTGAGGAGATGGAGGGTGAAACTTCAGCACGGGTTCCCCTCAGGGAGCGCCGTGTCTACCCTGCTCATCCTTCATGCTTGGTGAGGAAGAGAGCTTATATATTTGATGGCATGGGGAACTTTTATCATAAGGATTGGGATCTAGCAGACCTTTTTCAAAAAGAAGAGAAGGAATCGGGTGTAGGAGAAGGCCGAGGAAATGAGTTTTCTTGGTACCACGTTGAATTACCGAAAGGAAATCAAAAGTTGTCACAATCTGCACAGGACCTGATTGGTGTTTTCTGCCCACCTTTGAAACTCCAAGACATTCTTTCACTTGTTAGCAATGGACCCTTTTGTGCTCATGTAGATGGGGCGCTTGTCTTCCGGGTTAATTCGCCTGGTCCTCCCTCCAGCGACTTCACATTTAGGATTGCTGCTAGAGTTACAGAACATTCAGTAATTACCGTTTCCTTGGGGCGTGTTCCCAGGTTAGGCTTCTCACGTGTGGGTGAATCTCTACTTTCGGAGATTCCTAGTGTTGAAAGTTCCTATCCTTCAAGAGGTCAGCAGCAGGAAAGGACAGTGATCAAGGAGCATGTTCTTGAATTCTTATTGACTATGAATCACTCTGAGGAAGCTGACAACCCTGTGCCTAGATCTGTCTCAAATCTTGTAGTTCACATAATTGACACACATGTAGATCAGATTCAAGACCTTGTGACTAAGCTTGAGATGGAGTTGGACTCCGTGGAGCTTGACTTGGATAAAGGTGGTTATGCTTTGAAGAAACAAATGCTAGACGACAGAAGATTCCCCAAACTGCATATTAATTTGCAGCGTCTCTTGCAGGTGATTGCCCACGGAGAGCAAGTATATCTTCGGGTAAAAGAAAAATGCTCTTCAAAAAGATGGTTTGCCAGTGATGACCTTAACTCCCTTGAAGAACTAATTGGAAGGTTAAGGAGGCTGAAGGAGAATGTGGGGTTTATAGTAAATCGTGTCACAGCAATTCAGGCTGGTCTAGACAGCTGGCAGTCAGAGCAAATAAACAGGAAGCTGTACTATCTTTCGTTCCTTTCCATAATATTCCTCCCTTTGTCCATCATAACAGGAGTCTTTGGCATGAATGTTGGAGGAGTTCCATGGACAGGTCAAAATGCCCCAGAGCTAAAAGAAGGTTTTCGTAATGTCATGTTACTGTGTGTTGCTATGTTATTTCTTGTACTACTCTGCTTCATTTTCCCGGCCCTTTATACCCGTATAGCGGCTGCCTGGCGAAATAAGAGAGCTATGGGAAGAAGCTGGTCACTGAACAGGAAGTCATTGCTCAGGAGATCATTAAGAATAGGAGAGCAGGAGCGAGGGGGCTATCTTCGGATTTGA 1404 0.4487 MELAQHRVMENGVGEEMEGETSARVPLRERRVYPAHPSCLVRKRAYIFDGMGNFYHKDWDLADLFQKEEKESGVGEGRGNEFSWYHVELPKGNQKLSQSAQDLIGVFCPPLKLQDILSLVSNGPFCAHVDGALVFRVNSPGPPSSDFTFRIAARVTEHSVITVSLGRVPRLGFSRVGESLLSEIPSVESSYPSRGQQQERTVIKEHVLEFLLTMNHSEEADNPVPRSVSNLVVHIIDTHVDQIQDLVTKLEMELDSVELDLDKGGYALKKQMLDDRRFPKLHINLQRLLQVIAHGEQVYLRVKEKCSSKRWFASDDLNSLEELIGRLRRLKENVGFIVNRVTAIQAGLDSWQSEQINRKLYYLSFLSIIFLPLSIITGVFGMNVGGVPWTGQNAPELKEGFRNVMLLCVAMLFLVLLCFIFPALYTRIAAAWRNKRAMGRSWSLNRKSLLRRSLRIGEQERGGYLRI 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02272 467 Coils Coil 240 260 - -
Gma13g02272 467 Gene3D Magnesium transport protein CorA, transmembrane region 225 351 - -
Gma13g02272 467 PANTHER OS08G0130000 PROTEIN 1 467 - -
Gma13g02272 467 Pfam CorA-like Mg2+ transporter protein 215 420 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Gma13g02272 467 MobiDBLite consensus disorder prediction 1 21 - -
Gma13g02272 467 SUPERFAMILY CorA soluble domain-like 44 346 IPR045861 -
Gma13g02272 467 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 355 419 IPR045863 -
Gma13g02272 467 Gene3D Magnesium transport protein CorA, transmembrane region 352 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02272 Gma-Chr13 37524670 37531019 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02272 - - gmx:100804031 895.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02272 13 37524670 37531019 Gma13g02272 13 37524670 37531019 ECH