Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02257 ATGGCGGCCACCAGAGCAGTAACCATTGCCAGCAACTCCACATGCTCTCTGCTTGCAAAGAAAACCTTTGTGGGTGGCACTGCTCTTTCCCTCAACAACCTCAAATTTTGTCGTACTAGGAGGTCTTACACCTGCAGAGCCATCTACAATCCCCTGGTTGTCGTCAAGGAAGAAGGCCAACCCGAAACCTTTGATTATAGAGTTTTCTTTGTTGACAAATCTGGCAAGAAGGTTTCTCCCTGGCATGATATTCCCTTGCGGTTAGGTGATGATATCTTTAACTTCATTGTCGAGATTCCTAAAGAATCCAGTGCAAAGATGGAGGTTGCCACTGATGAGTCTTTCACTCCCATAAAACAAGATACAAAAAAGGGGAAGCTCCGATATTATCCCTATAATATACACTGGAACTATGGCTTACTTCCACAAACATGGGAAGATCCATCTTTTGCAAACTCTGAAGTTGAAGGAGCATTGGGAGATAATGATCCAGTTGATGTGGTTGAGATTGGTGAAAGACAGAGGAAAATAGGTGAGGTTCTCAAGGTCAAACCCTTGGGTGCATTAGCCATGATTGATGAAGGAGAACTTGATTGGAAAATAGTTGCAATTTCATTAGATGATCCGAAGGCGCCATTTGTAAATGATGTTGATGATGTTGAGAAGCATTTTCCAGGAACTCTAACTGCAATTAGGGACTGGTTTAGAGACTACAAGATACCTGATGGAAAACCTGCTAATAAATTTGGACTTGGCAACAAGGCAGCAAATAAGGATTATGCGCTTAAGGTCATCACAGAGACCAATGAGTCCTGGAATAAACTTATCAAGAGATCAATTCCTGCAGGAGAGTTGTCACTTGTGTAG 867 0.4245 MAATRAVTIASNSTCSLLAKKTFVGGTALSLNNLKFCRTRRSYTCRAIYNPLVVVKEEGQPETFDYRVFFVDKSGKKVSPWHDIPLRLGDDIFNFIVEIPKESSAKMEVATDESFTPIKQDTKKGKLRYYPYNIHWNYGLLPQTWEDPSFANSEVEGALGDNDPVDVVEIGERQRKIGEVLKVKPLGALAMIDEGELDWKIVAISLDDPKAPFVNDVDDVEKHFPGTLTAIRDWFRDYKIPDGKPANKFGLGNKAANKDYALKVITETNESWNKLIKRSIPAGELSLV 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02257 288 Pfam Inorganic pyrophosphatase 95 273 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Gma13g02257 288 PANTHER SOLUBLE INORGANIC PYROPHOSPHATASE 6, CHLOROPLASTIC-LIKE 33 288 - -
Gma13g02257 288 PANTHER INORGANIC PYROPHOSPHATASE 33 288 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Gma13g02257 288 ProSitePatterns Inorganic pyrophosphatase signature. 161 167 - -
Gma13g02257 288 SUPERFAMILY Inorganic pyrophosphatase 54 284 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Gma13g02257 288 CDD pyrophosphatase 91 270 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Gma13g02257 288 Gene3D Inorganic pyrophosphatase 54 288 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02257 Gma-Chr13 37426708 37429817 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02257 K01507 - gmx:100798544 588.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02257 13 37426708 37429817 Gma13g02257 13 37426708 37429817 ECH
Gma15g00580 15 4804421 4807868 Gma13g02257 13 37426708 37429817 GST