Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02248 ATGATGTCCCCATGCAATGTGATCCTATCCATTTTTTTCTTGGTGTGTACAAGAACACCACTACTGTCCCTAGCCCAGAACACCCCTCAAGACTTTCTTGATGTGCACAATCAGGCTCGTGCCGAGGTTGGCGTGGGTCCACTCTCATGGAACCACACCCTTCAAGCCTACGCTCAAAGTTATGCCAATAAGAGAATCCCAGACTGCAACCTCGAACACTCCATGGGACCCTTCGGCGAGAACATCGCCGAAGGGTACGCCGAAATGAAGGGTTCAGATGCTGTCAAATTCTGGCTCACTGAGAAGCCTTACTATGACCACCACTCCAACGCTTGTGTCCATGATGAGTGCCTGCATTATACTCAGATTGTGTGGCGTGATTCTGTTCATCTTGGGTGTGCTAGAGCTAAGTGTAACAATGATTGGGTGTTTGTTATTTGCAGCTATTCCCCACCGGGGAACATTGAAGGGGAACGACCTTATTGA 486 0.4897 MMSPCNVILSIFFLVCTRTPLLSLAQNTPQDFLDVHNQARAEVGVGPLSWNHTLQAYAQSYANKRIPDCNLEHSMGPFGENIAEGYAEMKGSDAVKFWLTEKPYYDHHSNACVHDECLHYTQIVWRDSVHLGCARAKCNNDWVFVICSYSPPGNIEGERPY 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02248 161 PANTHER - 1 161 - -
Gma13g02248 161 Pfam Cysteine-rich secretory protein family 33 149 IPR014044 -
Gma13g02248 161 ProSitePatterns CRISP family signature 2. 144 155 IPR018244 GO:0005576
Gma13g02248 161 CDD CAP_PR-1 29 161 - -
Gma13g02248 161 SUPERFAMILY PR-1-like 26 161 IPR035940 -
Gma13g02248 161 SMART SCP_3 27 157 IPR014044 -
Gma13g02248 161 PRINTS Allergen V5/Tpx-1 family signature 48 66 IPR001283 -
Gma13g02248 161 PRINTS Allergen V5/Tpx-1 family signature 94 107 IPR001283 -
Gma13g02248 161 PRINTS Allergen V5/Tpx-1 family signature 117 133 IPR001283 -
Gma13g02248 161 PRINTS Allergen V5/Tpx-1 family signature 144 157 IPR001283 -
Gma13g02248 161 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 1 161 IPR001283 -
Gma13g02248 161 Gene3D CAP 26 161 IPR035940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02248 Gma-Chr13 37355588 37356294 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02248 K13449 - gmx:100499927 350.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02248 13 37355588 37356294 Gma13g02248 13 37355588 37356294 ECH
Gma15g00590 15 4877020 4877715 Gma13g02248 13 37355588 37356294 GST