Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02243 ATGTGTGTGCTGGGGTTGGTGATCGTGGGTGATGTTGCCTACGCTCAAGATTCAGCAGAAGACTACGTGAATGCACACAATGCAGCACGAGCAGAGGTGGGTTCTCAATCACCAAGACAAACAGTGATTGTTCCAAGTTTGGCTTGGGATGATACGGTTGCTGCTTATGCAGAGAGCTATGCTAATCAACGCAAAGGTGACTGCCAACTGATCCACTCTGGTGGTGAATACGGAGAGAATATTGCAATGAGCACTGGTGAACTAAGTGGCACAGATGCAGTGAAAATGTGGGTTGATGAGAAATCCAACTATGACTATGATTCTAACTCTTGTGTTGGAGGAGAGTGCCTGCACTACACACAGGTCGTTTGGGCTAACTCGGTGCGTCTTGGATGTGCCAAAGTGACATGTGATAACGGAGGCACTTTCATCACTTGCAACTATGATCCCCCTGGCAACTTTGTTGGTGAAAGACCCTACAAACTGTAG 489 0.4744 MCVLGLVIVGDVAYAQDSAEDYVNAHNAARAEVGSQSPRQTVIVPSLAWDDTVAAYAESYANQRKGDCQLIHSGGEYGENIAMSTGELSGTDAVKMWVDEKSNYDYDSNSCVGGECLHYTQVVWANSVRLGCAKVTCDNGGTFITCNYDPPGNFVGERPYKL 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02243 162 SMART SCP_3 17 156 IPR014044 -
Gma13g02243 162 ProSitePatterns CRISP family signature 2. 143 154 IPR018244 GO:0005576
Gma13g02243 162 PANTHER PATHOGENESIS-RELATED PROTEIN 1B-LIKE 9 160 - -
Gma13g02243 162 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 9 160 IPR001283 -
Gma13g02243 162 CDD CAP_PR-1 19 160 - -
Gma13g02243 162 Gene3D CAP 17 160 IPR035940 -
Gma13g02243 162 PRINTS Allergen V5/Tpx-1 family signature 47 65 IPR001283 -
Gma13g02243 162 PRINTS Allergen V5/Tpx-1 family signature 93 106 IPR001283 -
Gma13g02243 162 PRINTS Allergen V5/Tpx-1 family signature 116 132 IPR001283 -
Gma13g02243 162 PRINTS Allergen V5/Tpx-1 family signature 143 156 IPR001283 -
Gma13g02243 162 Pfam Cysteine-rich secretory protein family 23 148 IPR014044 -
Gma13g02243 162 SUPERFAMILY PR-1-like 14 161 IPR035940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02243 Gma-Chr13 37329028 37329516 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02243 K13449 - gmx:106794095 342.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02243 13 37329028 37329516 Gma13g02243 13 37329028 37329516 ECH
Gma15g00593 15 4892794 4893532 Gma13g02243 13 37329028 37329516 GST