Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01280 ATGGTGGTGGAGATGGCCTCAATGACAACAATGGAAGTTGAGGACAGTGGAGACGTGATAGGAAACACAGAGCGCTGGAAGAAGAAGCATGAAGCTGCTACGACATCATACGACCATGAGGTAGGAGTGATGGAAGAAGCTTCTTCTACAATGAGGCTCTTCTTGTTCATGGTGCCTCTCTTAGTGCTTGCGGGCTTTGCTTCTATAAAGGGTTCAACTGTTTATAACGGAAGAGATTTTATTGCAAAACGTTATGCCTCGTGGAGCTCTCTAATTACTCCTTCAAATTCCTCGTCACAAACACTTCTTGATCCTCCTTCAAATTCCTCTTTACAAACACTTCATCAATCTAATGAAACTGAAGTTTTCAATGTCTCCAAACCCGGGTTCAATTTAGCTCCTGCAAATGAATCTGATGAATCTCACCCAAGACAGAAGCGGAAAAGAAAATTCAGTTTCTTAGATAAAACTGAAGCTGTTCTAGCACAAGCTCGAGCTGCAATCAGAGAAGCTGAAAATTGGAATCAAACACAAGATTCAGATTATGTTCCAGTAGGTCCAATGTATTGGAATCCTAAGGAATTTCACAGGAGCTACTTAGAAATGGAGAAACAGTTCAAAGTATTTGTGTACGAAGAAGGGGAGACTCCAGTTTTCCACAATGGACCTTGCAAAAGCATATACTCCATGGAGGGTAACTTCATACATGCTATTGAAATGAATGACCATTTTCGAACTAAAGATCCCAAGAAAGCACATGTGTTTTTCCTTCCTTTTAGTGTAGTAATGATGGTTCGATTTGTGTATGAAAGAGACTCACGTGACTTTGGCCCTATTAAAAAAACAGTCATAGACTATGTCAATCTCATTGCTACAAGATACCCTTATTGGAATAGAAGCCTTGGAGCTGATCACTTCATGCTTGCATGCCATGACTGGGGGCCAGAAGCATCATTCTCCTTACCTTACCTGCACAAGAACTCTATTCGAGTACTTTGCAATGCCAACACCTCTGAAGGATTCAAGCCTGCAAAGGATGTTTCATTTCCTGAAATCAATCTCCAAACCGGTTCAATAAATGGTTTCGTTGGTGGGCCATCTGCATCTAAACGTTCAATTTTGGCTTTCTTCGCTGGGGGAGTTCATGGCCCCATTAGGCCAATTCTTCTTGAGCATTGGGAAAACAAGGATGAAGATATTCAAGTTCACAAGTACCTCCCAAAGGGTGTTTCTTACTATGGCATGTTGAGGAAGAGCAAGTTTTGCCTCTGCCCTAGTGGGTATGAGGTCGCTAGCCCTAGAGTGGTGGAAGCAATTTACACAGGGTGTGTTCCTGTGCTCATTTCAGAGCACTATGTTCCTCCTTTTAGTGACGTTTTGAATTGGAAGTCGTTCTCAGTTGAGCTTTCAGTGAAAGACATACCCATCTTGAAGGACATTTTGATGAGTATTTCCCCAAGGCAGCATATAAGAATGCAGAGAAGAGTAGGACAAATTAGAAGACACTTTGAGGTTCATTCTCCACCCAAGCGATTCGATGTGTTTCACATGATCCTTCATTCTGTGTGGCTTAGGAGACTCAACTTCAGAGTCCGTGATGATCAATGA 1608 0.421 MVVEMASMTTMEVEDSGDVIGNTERWKKKHEAATTSYDHEVGVMEEASSTMRLFLFMVPLLVLAGFASIKGSTVYNGRDFIAKRYASWSSLITPSNSSSQTLLDPPSNSSLQTLHQSNETEVFNVSKPGFNLAPANESDESHPRQKRKRKFSFLDKTEAVLAQARAAIREAENWNQTQDSDYVPVGPMYWNPKEFHRSYLEMEKQFKVFVYEEGETPVFHNGPCKSIYSMEGNFIHAIEMNDHFRTKDPKKAHVFFLPFSVVMMVRFVYERDSRDFGPIKKTVIDYVNLIATRYPYWNRSLGADHFMLACHDWGPEASFSLPYLHKNSIRVLCNANTSEGFKPAKDVSFPEINLQTGSINGFVGGPSASKRSILAFFAGGVHGPIRPILLEHWENKDEDIQVHKYLPKGVSYYGMLRKSKFCLCPSGYEVASPRVVEAIYTGCVPVLISEHYVPPFSDVLNWKSFSVELSVKDIPILKDILMSISPRQHIRMQRRVGQIRRHFEVHSPPKRFDVFHMILHSVWLRRLNFRVRDDQ 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01280 535 PANTHER EXOSTOSIN FAMILY PROTEIN 101 532 - -
Gma13g01280 535 Pfam Exostosin family 203 484 IPR040911 -
Gma13g01280 535 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 101 532 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01280 Gma-Chr13 27160516 27185391 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01280 - - gmx:100817730 927.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g01280 13 27160516 27185391 Gma13g01280 13 27160516 27185391 ECH
Gma10g00590 10 6189932 6194625 Gma13g01280 13 27160516 27185391 GST
Gma19g01789 19 47141770 47146521 Gma13g01280 13 27160516 27185391 PCT
Gma03g01738 03 43485066 43488984 Gma13g01280 13 27160516 27185391 PCT
Gma13g01280 13 27160516 27185391 Gma19g01789 19 47141770 47146521 PCT
Gma13g01280 13 27160516 27185391 Gma03g01738 03 43485066 43488984 PCT