Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01278 ATGGGACTCACAGCACTGAAGGCGGAGAATCTGAAGCCAGTAATCCTCAAAGCTGGTGTTCCCTTGGCTGCATCTTTTGCTGGTTTGATCTATGCATGGATTGTTGCAAGGAAAAACTTGTCTACCAAAGTTTTTTCTTCACCAGAAAATGAGTGTGGTTCTCCAAAGATCACTTGTCATCAGGGAACTAAACATGAAGAAAGCTTTCATCACAATCTTTCTTCTTTTGAAGATGAAGAATCATCACCTTCTCCCATGAATAGCAGTGTTCTTTCTGGGAGCTTGGTGATCCATGAATACAACAACCCTTGTTTGGAACAAGAGATCACTAGCCTAAGAAGCCAAATTGAAGGACTTCAAATGAGGGAATTGGCCTTGCGTTTGCAGTTCGAGCTGTATTGTGAAATGAAGGAACAAGAATCTTTGCTTCTAGAGGTAAAAAACTTGTTGTCTTTGGAGAATGATCGCGCCGAGTTCTTGAGTAAAGAGATTTCGTCGATAGAGACCGAGACTATGAGGTTGGAGAGTTTTGTAGTCCAATACATGAGTGTTATTGAACAGCTTCAGTATTGGAAATCACAGAATAGGGTGCTTCAAAGGAGGGTTCAAAGGCTACTTAGGGACTCAAAGGCCAAATCTCGTTTGATAAAGGGTCAGGCTTTGAAGATCAAAGAGAAAGAAGCAGTGATATTGAGAAACCATGATGCCTTGCAAACAAGGGTCAGTGTCATTAACAAGTTAAAGGGTGAAATCATAGAGCTGCAAAGGATTTTGGACCAATTGGAGGATGAGAAGAATGAGGTCGCCAAGAAGCTTGAAACCGCAGAAGGGTATGTGTCTAAGTCAGACAAGGAAAAGATACATAGAAAACCTTTGAAATATTATTTGGAGGTTGAATCAAGAGATGTGAGTAAGGAAGACTACAACAAGGTTCTCAATGAATTGGAGGAGGTCAAGAAGGAACGCGTAACTGAAGTTGAAGAGCTGATTCATTTGAGGAGGGTCAATGCTTGCTTAAGGGAAGAGCTAATGAGGCACTATGAAGAACAACATGAGCAAGATAGAGACCATGTAGAGGTGTATGAGTCAGAGCATGAATTGCATCATTCCCTTTTGGAGCATCGCAATGGTTCTGCTCATGGTGATCATGCTTCTTCCAAAAGGAGAAAGTTGCTTAAGAGGCTCAAGAGGTGGGTTGAAGGAAGTGAAAAGGTAAGAGTGAAGCCTGAAATTAAGTGCCTTGATATGCATTCTGGTTCCTATGGATCAAAGAAACCACAAGTTCCTCCAAGTGCAAGGTTCTGCTCTAGTGCTTGA 1317 0.4176 MGLTALKAENLKPVILKAGVPLAASFAGLIYAWIVARKNLSTKVFSSPENECGSPKITCHQGTKHEESFHHNLSSFEDEESSPSPMNSSVLSGSLVIHEYNNPCLEQEITSLRSQIEGLQMRELALRLQFELYCEMKEQESLLLEVKNLLSLENDRAEFLSKEISSIETETMRLESFVVQYMSVIEQLQYWKSQNRVLQRRVQRLLRDSKAKSRLIKGQALKIKEKEAVILRNHDALQTRVSVINKLKGEIIELQRILDQLEDEKNEVAKKLETAEGYVSKSDKEKIHRKPLKYYLEVESRDVSKEDYNKVLNELEEVKKERVTEVEELIHLRRVNACLREELMRHYEEQHEQDRDHVEVYESEHELHHSLLEHRNGSAHGDHASSKRRKLLKRLKRWVEGSEKVRVKPEIKCLDMHSGSYGSKKPQVPPSARFCSSA 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01278 438 PANTHER CHUP1-LIKE PROTEIN 1 438 - -
Gma13g01278 438 Coils Coil 102 122 - -
Gma13g01278 438 Coils Coil 244 278 - -
Gma13g01278 438 MobiDBLite consensus disorder prediction 68 90 - -
Gma13g01278 438 MobiDBLite consensus disorder prediction 417 438 - -
Gma13g01278 438 Coils Coil 301 328 - -
Gma13g01278 438 Coils Coil 344 364 - -
Gma13g01278 438 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 1 438 IPR040265 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01278 Gma-Chr13 27137489 27139255 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01278 - - gmx:100776941 773.467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g01278 13 27137489 27139255 Gma13g01278 13 27137489 27139255 ECH
Gma10g00584 10 6122712 6124133 Gma13g01278 13 27137489 27139255 GST
Gma19g01785 19 47116958 47119016 Gma13g01278 13 27137489 27139255 PCT
Gma03g01735 03 43460425 43462273 Gma13g01278 13 27137489 27139255 PCT
Gma13g01278 13 27137489 27139255 Gma19g01785 19 47116958 47119016 PCT
Gma13g01278 13 27137489 27139255 Gma03g01735 03 43460425 43462273 PCT