Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01245 ATGGGTATACTGTACGACGACGTAGTGATCATAAGCCCGCCAGAAAAAGATGGCGACCCAACTCTCCTCACTGTCAATTGCCCCGACAAAACCGGTCTGGGTTGCGATTTGTGTCGCATCATACTGTTCTTCGGCCTCAACATACTCAGAGGAGATGTGTCGACgGATGGGAAATGGTGCTACATAGTTTTCTGGGTGGTTGGGAAACAGAGGACGAGGTGGAGTTTGTTGAAGAAGAGGCTCATTGAGGCGTGCCCTTCTTTCTCCTCTGCCTCTGGAATCTCTTATTATCGATCTGACCTGCAGCCGTCGAAGCCTTCTGATGTCTTTCTTTTGAATTTCTGTTGTCACGATCGGAAGGGCCTGTTGCATGatgttactgaggttctttgtgagctagaacttactataaagaaagtgaaggtatctactacacctgatggcaaagtgatagatctgtttttcatcacagataccagggaacttctacatacaaagaagcgaaaggacgaaacaattgaatacttaaccgagattatgggagatgccatcatttctattgacattgaattggttggccctgaaattacagcttgttcccaggctcctccattccttccaactgcaatcacagaagatgtctttgatttggaattgcctgatttggctcgaggtggaactctcagatcagattatgtttctatcacgatggacaacttgcttagtcctgctcacactcttgtccaaattatgtgccaggaccacaaaggtcttctttatgacatcatgagaactctgaaggactataacattcagATTTCTTATGGGCGTTTCACTGCAAAACCTAGAGGAAAATGTGAGATTGACTTGTTCATCATGCAAGCAGATGGCAAGAAGATAGTTGACCCCAACAAGCAGAATTCTTTGTCATCACGCCTTAGAATGGAATTACTTCGACCACTCAGAGTAGCCATTGTGAGTAGGGGCCCTGATACCGAGCTTTTGGTATCAAATCCGGTGGAATTATCTGGCAAGGGCCGGCCTCTTGTTTTTTATGATATCACTCTTGCTCTCAAAATGCTTGACACTTGCATCTTTTTGGCTAAAATTGGGAGACACTTGATCGGAGATCGTGAGTGGGAGGTATATAGAATCTTGCTTGATGAAGGGGAGGGGTTATCTGTTCCACGGAACAAGGTTGAGGAGGGAGTTTGGAAAATGCTGATGGGTTGGGAGTAA 1239 0.3002 MGILYDDVVIISPPEKDGDPTLLTVNCPDKTGLGCDLCRIILFFGLNILRGDVSTDGKWCYIVFWVVGKQRTRWSLLKKRLIEACPSFSSASGISYYRSDLQPSKPSDVFLLNFCCHDRKGLLHDVTEVLCELELTIKKVKVSTTPDGKVIDLFFITDTRELLHTKKRKDETIEYLTEIMGDAIISIDIELVGPEITACSQAPPFLPTAITEDVFDLELPDLARGGTLRSDYVSITMDNLLSPAHTLVQIMCQDHKGLLYDIMRTLKDYNIQISYGRFTAKPRGKCEIDLFIMQADGKKIVDPNKQNSLSSRLRMELLRPLRVAIVSRGPDTELLVSNPVELSGKGRPLVFYDITLALKMLDTCIFLAKIGRHLIGDREWEVYRILLDEGEGLSVPRNKVEEGVWKMLMGWE 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01245 412 SUPERFAMILY ACT-like 107 176 IPR045865 -
Gma13g01245 412 PANTHER FOUR ACT DOMAIN ACT DOMAIN PROTEIN WHICH PROTEIN 2 412 - -
Gma13g01245 412 ProSiteProfiles ACT domain profile. 111 194 IPR002912 -
Gma13g01245 412 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 2 412 IPR040217 -
Gma13g01245 412 SUPERFAMILY ACT-like 19 81 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01245 Gma-Chr13 26769653 26773617 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01245 - - gmx:100816138 829.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g01245 13 26769653 26773617 Gma13g01245 13 26769653 26773617 ECH
Gma10g00532 10 5487544 5491091 Gma13g01245 13 26769653 26773617 GST
Gma19g01749 19 46801838 46805064 Gma13g01245 13 26769653 26773617 PCT
Gma03g01696 03 43153039 43155623 Gma13g01245 13 26769653 26773617 PCT
Gma13g01245 13 26769653 26773617 Gma19g01749 19 46801838 46805064 PCT
Gma13g01245 13 26769653 26773617 Gma03g01696 03 43153039 43155623 PCT