Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01239 ATGGAGTTGGACGGCGTTCTCCTCGGCATGTGCAACCCTCTCCTCGACATCTCTGCCGTCGTCGACGACGCTTTCTTGCAAAAATACGGTATCAAGTTGAACGATGCGATTCTCGCTGAGGATAAGCACAAACCTATGTATGAAGAATTGGCTAACAATCCTAATGTGGAGTACATTGCTGGAGGTGCTACTCAGAATTCAATCAGGGTTGCTCAGTGGATGCTTCAAGCACCAGGTGCCACAAGTTACATAGGTTGCATAGGAAAGGACAAATTTGGAGAGGAGATGAAGAAGAAATGTACACTTGATGGTGTAAAGGTTAACTATTATGAAATCGACAATACACCTACTGGAACTTGTGCTGTTTGTGTGGTTGGCGGTGAAAGGTCCCTTGTTGCCAACTTATCAGCTGCAAATTGCTATAAGTCTGAGCATTTGACGAGACCGGAAAATTGGGCATTAGTTGAAAAGGCCAAGTATTTCTACATTTCTGGCTTTTTCCTCACTGTATCTCCTGATTCCATACAATTAGTTGCTGAACATGCAGCTGCAAATAACAAGTTCTTCATGATGAACCTTTCTGCCCCATTTATCTGTGAGTTCTTCAAGGATGCACTGAATAAAGTTCTGCCATATATGGACTACGTTTTTGGTAATGAGACTGAAGCAAGAACATTTTCTAAAGCTCAAGGCTGGGAGACTGATAATGTTGAGGAAATAGCTTTGAAGATTTCTCAGTTGCCAAAGGCATCGGAAACACATAAAAGGATTACGGTTATCACCCAAGGTGCAGATCCTGTTTGCGTTGCCGAGGATGGAAAAGTGAAAATTTACCCCGTGATACCGTTACCTAAAGAGAAATTAGTTGACACAAATGGAGCAGGAGATGCTTTTGTTGGAGGATTTCTTTCACAATTGGTTAAGCATAAGCCCATTGAAGAATGCATTAGAGCTGGGTGTTATGCAGCCAATGTTATCATCCAAAGGCCTGGCTGCACATACCCACCGACGCCTGATTTTCATTGA 1026 0.4288 MELDGVLLGMCNPLLDISAVVDDAFLQKYGIKLNDAILAEDKHKPMYEELANNPNVEYIAGGATQNSIRVAQWMLQAPGATSYIGCIGKDKFGEEMKKKCTLDGVKVNYYEIDNTPTGTCAVCVVGGERSLVANLSAANCYKSEHLTRPENWALVEKAKYFYISGFFLTVSPDSIQLVAEHAAANNKFFMMNLSAPFICEFFKDALNKVLPYMDYVFGNETEARTFSKAQGWETDNVEEIALKISQLPKASETHKRITVITQGADPVCVAEDGKVKIYPVIPLPKEKLVDTNGAGDAFVGGFLSQLVKHKPIEECIRAGCYAANVIIQRPGCTYPPTPDFH 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01239 341 PANTHER - 3 340 IPR001805 GO:0004001|GO:0006166
Gma13g01239 341 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 290 303 IPR002173 GO:0016773
Gma13g01239 341 Pfam pfkB family carbohydrate kinase 26 335 IPR011611 -
Gma13g01239 341 Gene3D - 15 134 - -
Gma13g01239 341 PANTHER ADENOSINE KINASE 2 3 340 - -
Gma13g01239 341 CDD adenosine_kinase 5 335 - -
Gma13g01239 341 SUPERFAMILY Ribokinase-like 8 334 IPR029056 -
Gma13g01239 341 Gene3D - 8 327 IPR029056 -
Gma13g01239 341 PRINTS Adenosine kinase signature 66 75 IPR001805 GO:0004001|GO:0006166
Gma13g01239 341 PRINTS Adenosine kinase signature 83 97 IPR001805 GO:0004001|GO:0006166
Gma13g01239 341 PRINTS Adenosine kinase signature 114 129 IPR001805 GO:0004001|GO:0006166
Gma13g01239 341 PRINTS Adenosine kinase signature 152 178 IPR001805 GO:0004001|GO:0006166
Gma13g01239 341 PRINTS Adenosine kinase signature 261 280 IPR001805 GO:0004001|GO:0006166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01239 Gma-Chr13 26672099 26676243 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01239 K00856 - gmx:100801737 696.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00527 10 5380892 5385999 Gma13g01239 13 26672099 26676243 GST
Gma19g01722 19 46542219 46547525 Gma13g01239 13 26672099 26676243 PCT
Gma03g01675 03 42879329 42883417 Gma13g01239 13 26672099 26676243 PCT