Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00706 ATGGCCATGGTTTGGTGCTTCTCTCTTTTGCCTGTGAGGAAGGAGAAACTCAAGGGGAATGAAAGGTCTTCAAAAGAGGACTTTAACACTCTACTTGCCAAACTACAATCTACAAAAAAAATATCATCAGAGCCAGCCACTTTTGATGCCCTGTTCAATGCGAGGATTACAACCCTTGAGAGTCCTGTGAAGGCTGAAGCTCAGGAAACTTATAAAGATGAAGATTCAACATTGATCAAGAGAGAACTCTCTGATTTTTATCTCCAAGATCATGAAGCTGTGGCAAGCAAAGGATATGATACAACAGATAAAGAGGTAGAGTACCCCATTTTGTATGAAAACCAAGTCAACAATGAATTGGAAGACAAAAGTGATAGATTCAGCCGAAAGAGTGTTGATACAACCGAAAGCGGACACACCAGTGATCCTGGAATTGGCATGGCTGATTCCTGGGCTTCTCCAAAGTTCAAGAGATACTTATCCAACCTTGAAAAGTTTGATGAGCATGGGAAGATTACTCGTCACTTGCCAGCGGCTTCAAAGTCGAAGTCTTTCAAGAATTTTCAGGAGTTATCATCAATGGTCAGTCTTGAAAGCCCCAGGTCTGTGATGAGTCACCACAGTGCAGATAGAGTATTGTTGAAAAGGCACTCTTCAAGTCAGGTACTCCCTTCTAGAAGTAAAAAATTGTGGTGGAAGATGATCCTGTGGAGCCACAGGAACATACAGAGAACTCTCTCTAGCAATTCAACACTAGTTCCTACTAGTGCTGCTTTAAATAGTGGATACTCTTCAGACACCCTTGAACCAAAACAAGGCAAGGCATTGAGGCCTGTGAAGTCTTCTGATTCAATTACTATGGAATCCTTTAACAAACGAAGCAGAACTGGTAAAAATATTGATAATCAAAGGGGGAGCAGGTTTCAAAGTGACCAATGGATTTCTTTCTCAACAGAATCATCCTCTTTTACCAGAGTGGATGCATGGGTGAAAGGTCTCGAAATTCAGCAGCCGCTTCCTGAGGATGATTTTGATGTCGACAATGCTAGAAGCATTGTTTTCCCACCTTCTCCTAATGCTGGTGGATCAATGATCAGAACCACATCTCAGTTGACTTATCCAGATGCCAATCTTTCAAAAGAGGCTTTAACTGCCATAAGTGTAGTCCTGTCTCTAAATCCAACTTCAACTATTGCTCACATATCTGGTATTGGTATAAAAGCCATCCCTTCTATTTCACACTTATCCAGTCTCCGTGCTGTCAACTTGTCAAACAATTTCATAGTTCACATCTCACCAGGAGTTCTACCAAAGGGTATTCAAACACTTAACTTGTCAAAAAACAAAATCAGCACCCTTGAGGGCCTCAGAGAATTGGCCAAGTTGCGGATACTTGACCTAAGCTACAACCGCATTTCGAGAATTGGACAAGGTTTGTCAAGTTGTACACTAATCAAAGAGCTGTATCTTGTTGGGAACAAGATAAGTGATGTTGAAGGGCTACACAGGCTATTGAAGCTAACAGTTCTAGACTTGAGCTTCAACAAGATCACAACAGCAAAAGCATTAGGCCAGCTTGTGGCTAACTTCAACTCACTTAAGGCCCTTAATCTCCTTGGAAATTCAATTCAAAGCAACATCAGCGATGACCAGCTAAGCAAAGCAGTCTGTGGTCTTCTTCCAAAGATGGTGTACCTGAACAAGCAACCTGTCAAGGCTCATAGGACACGCGGAATATTAAGCGATAGTGTTGCCAGAGCTGCACTCGGGAGCAGCACGCGTAGCTGCAACAGAAGATCAATTAGAAGAGTTGGCCATGGAGGATCAAATCTCTCCAGAGGTAATAGAAGGAGTACCAGTGTTTCCCAGAAAAGCACGAACCGGACAAGGAAGTGA 1896 0.4251 MAMVWCFSLLPVRKEKLKGNERSSKEDFNTLLAKLQSTKKISSEPATFDALFNARITTLESPVKAEAQETYKDEDSTLIKRELSDFYLQDHEAVASKGYDTTDKEVEYPILYENQVNNELEDKSDRFSRKSVDTTESGHTSDPGIGMADSWASPKFKRYLSNLEKFDEHGKITRHLPAASKSKSFKNFQELSSMVSLESPRSVMSHHSADRVLLKRHSSSQVLPSRSKKLWWKMILWSHRNIQRTLSSNSTLVPTSAALNSGYSSDTLEPKQGKALRPVKSSDSITMESFNKRSRTGKNIDNQRGSRFQSDQWISFSTESSSFTRVDAWVKGLEIQQPLPEDDFDVDNARSIVFPPSPNAGGSMIRTTSQLTYPDANLSKEALTAISVVLSLNPTSTIAHISGIGIKAIPSISHLSSLRAVNLSNNFIVHISPGVLPKGIQTLNLSKNKISTLEGLRELAKLRILDLSYNRISRIGQGLSSCTLIKELYLVGNKISDVEGLHRLLKLTVLDLSFNKITTAKALGQLVANFNSLKALNLLGNSIQSNISDDQLSKAVCGLLPKMVYLNKQPVKAHRTRGILSDSVARAALGSSTRSCNRRSIRRVGHGGSNLSRGNRRSTSVSQKSTNRTRK 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00706 631 MobiDBLite consensus disorder prediction 122 149 - -
Gma13g00706 631 Pfam Leucine Rich repeat 506 518 IPR001611 GO:0005515
Gma13g00706 631 Gene3D Ribonuclease Inhibitor 461 577 IPR032675 -
Gma13g00706 631 PANTHER NISCHARIN RELATED 4 630 - -
Gma13g00706 631 ProSiteProfiles Leucine-rich repeat profile. 506 527 IPR001611 GO:0005515
Gma13g00706 631 MobiDBLite consensus disorder prediction 611 631 - -
Gma13g00706 631 SMART LRR_sd22_2 482 503 - -
Gma13g00706 631 SMART LRR_sd22_2 459 481 - -
Gma13g00706 631 SMART LRR_sd22_2 504 525 - -
Gma13g00706 631 SMART LRR_sd22_2 437 458 - -
Gma13g00706 631 Pfam Leucine rich repeat 417 472 IPR001611 GO:0005515
Gma13g00706 631 PANTHER OUTER ARM DYNEIN LIGHT CHAIN 1 PROTEIN 4 630 - -
Gma13g00706 631 ProSiteProfiles Leucine-rich repeat profile. 484 505 IPR001611 GO:0005515
Gma13g00706 631 ProSiteProfiles Leucine-rich repeat profile. 461 483 IPR001611 GO:0005515
Gma13g00706 631 MobiDBLite consensus disorder prediction 261 283 - -
Gma13g00706 631 MobiDBLite consensus disorder prediction 122 136 - -
Gma13g00706 631 ProSiteProfiles Leucine-rich repeat profile. 439 460 IPR001611 GO:0005515
Gma13g00706 631 SUPERFAMILY Outer arm dynein light chain 1 403 570 - -
Gma13g00706 631 Gene3D Ribonuclease Inhibitor 363 460 IPR032675 -
Gma13g00706 631 MobiDBLite consensus disorder prediction 595 631 - -
Gma13g00706 631 SMART LRR_typ_2 459 482 IPR003591 -
Gma13g00706 631 SMART LRR_typ_2 415 438 IPR003591 -
Gma13g00706 631 SMART LRR_typ_2 504 526 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00706 Gma-Chr13 21164068 21167722 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00706 410 571 Receptor kinase-like Gene Family AT5G56040 32.778 7.22e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00706 - - gmx:100808998 1228
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00706 13 21164068 21167722 Gma13g00706 13 21164068 21167722 ECH