Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00695 ATGGAAATGAAGGCAAAGAACAACAACAACAAGAACAAGGTTGGGAGTGAATTGGGTTGTGGTCTCATGGGGAGAATTCTCCACCTCAAAAGCCACAAGATGAGAAAAGCATCTGTTCACTCCCTACCCTTGAAGAATGCACACAGTGATGATGATGATGTCAAAACTGAAGAATCAAAGGTTGCAAGAAAAAGCTTCACTCACACTGAGCCACCACACAAACTGAGTGGTGCAGAGCAGAAACCTGCCAGAATGAGTGTCTCTATTATTCACCACCAACAACAACAACCTTGTACAAATCGAAACAACCAACATCTGAGGCATTCAGATGTTGCTGCAAGAAGCTCAACATCATCGTTCACTAGTACTTCAATTTCATCTCACACTAAGTTTCAACAAAACCAGGACAAGGATCATGAGAGGAAGCCACGTGGAGACCCCACTGGAAATTCTCTTGCACTTGCTAGGATAAGCACTAGCAAAGAGAACAATGAGAACAAGAAGTCTCAATTGAAACTCACCGGGAATTTGCTTGTGAATAACACACCAAGAAGGAAGAGTGTGGAATACATGCCCAAGAGTGCAGAGCTGAACTCTGTTCGCAGTTCTTACACCAATGCAAGCAAAGTCTTGATGGGGAACATCATGAGGAGGAACAGCAACAGCAACGAGGTTGCACAGTTTTTGAGTCCAAGGCTGAAAAAAATGGACCCTGAGGTGTTGAAATCCATGGGAAATGAAGCATACAAGCAGGGAAGATTTGAAGAGGCCTTGGCTTTGTATGATCAAGCAATTGCACTCGATTTGAATAAGGCGGTATATCATTGCAACAAGAGTGCAGCTTTAATTGGCTTAGGAAGGCTTCAGGAAGCAATTGTTGAGTGTGAGGAATCTATCAAGCTGGACCCTTCTTATGTCAGAGCCTACAATCGTTTGGCCACAATATATGTCAGGTTGGGAGAAGCAGAAAAAGCACTAGATTGCAATCAGTCAATCCCATATGTTGATTCAATACTTGCTTTCCAAGCTCAGGCTCTTCAAAATCACCTTAACAAATGCATAGAAGCACGGAAAGTCAATGCGTGGAGTGATATACTAAAGGAAACACAGTTTGCAATATCCTTAGGTGCTGATTCAGCTCCACAGGTCTATGCTTTACAAACTGAAGCCTTGCTGAAGCTCTTAAGATATCAAGAGGCCTATGTCATCTACGATAAAATGCCAAAATTTTCAATTGATTGGTGTACCAAGATGTTTGGCCCAGCTCGCAGCGCTTACCTGTTGGTGATAGGCTCAATGGTTTACTTGGCATCTGGCAGGTTTGAGGAAGCTGTGGCATCAACTCAGCAAGCAGCTAAAGTTGATCCAGGCAATAGAGAGGTGAATGCAATGGTAAGGAAGGCCAGAGCTGCAACATCAGCTAGAATGAGCGGAAACTTGCTCTTCAAGGCATCGAAATTCACCGAAGCATCTGGCGCGTACAACGAAGGACTAGAGCATGATCCACACAACTCAGTTCTACTATGCAACAGAGCTGCATGTCGTTCCAAACTTGGTCAAAATGAGAAAGCAATTGAAGATTGTAACGCGGCACTTATGGTTCAGCCAGGTTATAGCAAAGCAAGGCTAAGGAGGGCAGATTGCAACGCCAAGTTGGAAAGGTGGGAAGCTGCTATTCAAGACTACGAAATGCTATTAAGGGAAAGGCCAGGGGATGAGGAAGTGGCAAGGGCTTTGTTCGAAGCTCAGCTCCAACTCAAGGTGCTTCATGGTGAAGATATTAAGGACTTGAAATTTGGTTCAAACTTGGTTTCCATCTCAAGTAATGATCGGTTCAGACATTATGTAACCTCACCTGGTATGGCTGTGGTGCTCTTTAGCAACAAGACAACCCACAAGAAAGTGTTGCTAGTGTTGGAGCAAATCAGCAAGAGATTCCCATCAGTTAATTTCCTCAAGGTGGAAATCGAAGACCACCCCTACTTAGCAAAGTCAGAAGGTGTGAGCTCTATCCCAGCCTTCAAAATATACAAGAACGGATCAAGGGTTAAAGAAATCTCAGGCAACAACCACGAGTTGTTAGAAAGATCAGTTAAATTGTATAGCAGCTGA 2112 0.4375 MEMKAKNNNNKNKVGSELGCGLMGRILHLKSHKMRKASVHSLPLKNAHSDDDDVKTEESKVARKSFTHTEPPHKLSGAEQKPARMSVSIIHHQQQQPCTNRNNQHLRHSDVAARSSTSSFTSTSISSHTKFQQNQDKDHERKPRGDPTGNSLALARISTSKENNENKKSQLKLTGNLLVNNTPRRKSVEYMPKSAELNSVRSSYTNASKVLMGNIMRRNSNSNEVAQFLSPRLKKMDPEVLKSMGNEAYKQGRFEEALALYDQAIALDLNKAVYHCNKSAALIGLGRLQEAIVECEESIKLDPSYVRAYNRLATIYVRLGEAEKALDCNQSIPYVDSILAFQAQALQNHLNKCIEARKVNAWSDILKETQFAISLGADSAPQVYALQTEALLKLLRYQEAYVIYDKMPKFSIDWCTKMFGPARSAYLLVIGSMVYLASGRFEEAVASTQQAAKVDPGNREVNAMVRKARAATSARMSGNLLFKASKFTEASGAYNEGLEHDPHNSVLLCNRAACRSKLGQNEKAIEDCNAALMVQPGYSKARLRRADCNAKLERWEAAIQDYEMLLRERPGDEEVARALFEAQLQLKVLHGEDIKDLKFGSNLVSISSNDRFRHYVTSPGMAVVLFSNKTTHKKVLLVLEQISKRFPSVNFLKVEIEDHPYLAKSEGVSSIPAFKIYKNGSRVKEISGNNHELLERSVKLYSS 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00695 703 Pfam Tetratricopeptide repeat 493 526 - -
Gma13g00695 703 Pfam Tetratricopeptide repeat 295 326 - -
Gma13g00695 703 Gene3D Tetratricopeptide repeat domain 237 589 IPR011990 GO:0005515
Gma13g00695 703 Gene3D Glutaredoxin 597 702 - -
Gma13g00695 703 MobiDBLite consensus disorder prediction 132 146 - -
Gma13g00695 703 SUPERFAMILY Thioredoxin-like 592 695 IPR036249 -
Gma13g00695 703 MobiDBLite consensus disorder prediction 45 77 - -
Gma13g00695 703 ProSiteProfiles TPR repeat profile. 425 458 IPR019734 GO:0005515
Gma13g00695 703 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 9 702 IPR044534 -
Gma13g00695 703 Coils Coil 545 565 - -
Gma13g00695 703 Pfam Tetratricopeptide repeat 238 268 IPR013105 -
Gma13g00695 703 MobiDBLite consensus disorder prediction 40 151 - -
Gma13g00695 703 CDD TRX_family 612 690 - -
Gma13g00695 703 ProSiteProfiles TPR repeat profile. 238 271 IPR019734 GO:0005515
Gma13g00695 703 SMART tpr_5 424 458 IPR019734 GO:0005515
Gma13g00695 703 SMART tpr_5 306 338 IPR019734 GO:0005515
Gma13g00695 703 SMART tpr_5 505 538 IPR019734 GO:0005515
Gma13g00695 703 SMART tpr_5 272 305 IPR019734 GO:0005515
Gma13g00695 703 SMART tpr_5 471 504 IPR019734 GO:0005515
Gma13g00695 703 SMART tpr_5 238 271 IPR019734 GO:0005515
Gma13g00695 703 SMART tpr_5 539 572 IPR019734 GO:0005515
Gma13g00695 703 ProSiteProfiles TPR repeat profile. 471 504 IPR019734 GO:0005515
Gma13g00695 703 SUPERFAMILY TPR-like 238 460 IPR011990 GO:0005515
Gma13g00695 703 PANTHER 43KDA POSTSYNAPTIC PROTEIN-RELATED 9 702 - -
Gma13g00695 703 SUPERFAMILY TPR-like 475 587 IPR011990 GO:0005515
Gma13g00695 703 MobiDBLite consensus disorder prediction 87 131 - -
Gma13g00695 703 Pfam Thioredoxin 611 694 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00695 Gma-Chr13 20987509 20991260 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00695 232 541 Glycosyltransferase AT3G04240 21.406 5.46e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00695 K09527 - gmx:100791862 1365.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00695 13 20987509 20991260 Gma13g00695 13 20987509 20991260 ECH