Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00690 ATGGCTCTTCCTCACTCTTTCGCTACCATTATCATCTCTTTCTTTCTCCTCAATCTCCACCACCACCACGCCGAGTCAACTCGGCCCCCTTATTCCTGCGACTCGTCCTCCAACTCACCCTACTACTCATTCTGCAACACCAAGCTCCCCATCACCAAAAGAGCCCAAGACCTCGTGTCGCGACTCACCCTCGACGAGAAACTCGCCCAACTCGTCAACACGGCACCGGCGATTCCCCGACTCGGCATCCCGAGTTACCAGTGGTGGAGCGAAGCCCTGCACGGCGTCGCCGACGCCGGCTTCGGCATCAGGTTCAATGGTACCATCAAATCCGCCACCAGCTTCCCCCAAGTCATTCTCACCGCAGCTTCCTTCGACCCAAACCTCTGGTACCAAATTAGCAAGACTATTGGGAGGGAAGCGAGGGCGGTGTACAATGCGGGGCAAGCGACGGGGATGACGTTTTGGGCTCCGAACATAAACGTTTTCAGGGATCCACGGTGGGGGAGAGGGCAAGAGACTGCAGGAGAAGACCCTTTGATGAATGCCAAGTATGGTGTGGCGTATGTGAGAGGGCTTCAAGGGGATTCCTTTGAAGGAGGGAAACTGGCTGAGAGGCTTCAAGCTTCGGCGTGTTGCAAGCACTTCACTGCCTATGATTTGGACCAATGGAAGGGCCTCGATCGCTTTGTCTTCGATGCTCGTGTCACATCGCAAGATTTGGCAGACACATACCAACCTCCATTTCAAAGTTGCATAGAGCAAGGTCGAGCCAGTGGGATAATGTGTGCCTACAACCGTGTCAATGGGGTTCCAAACTGTGCAGATTTCAATCTTCTAACCAAAACCGCAAGACAACAATGGAAATTCGATGGGTATATTACATCAGATTGTGGAGCAGTCTCTATCATACACGAGAAGCAAGGTTATGCAAAAACAGCAGAGGACGCTATAGCCGATGTTTTTAGGGCAGGGATGGATGTGGAGTGTGGTGATTACATAACCAAGCATGCAAAATCAGCAGTGTTCCAAAAAAAACTACCCATATCTCAAATCGACCGTGCCCTTCAGAACCTCTTCTCCATTAGAATAAGACTAGGCCTATTCGATGGAAACCCCACCAAGCTTCCATTTGGCACAATTGGTCCCAACGAAGTGTGCTCCAAACAAAGCCTCCAACTAGCCCTAGAAGCAGCAAGGGATGGCATAGTGCTTCTAAAGAACACAAACTCACTCCTCCCACTTCCAAAAACAAACCCCACTATCGCATTAATAGGCCCCAATGCCAATGCCTCATCAAAAGTCTTCCTAGGAAACTATTATGGGCGTCCTTGCAATTTGGTGACACTTTTGCAAGGCTTTGAGGGCTATGCTAAAACGGTTTACCATCCTGGGTGTGATGATGGCCCACAATGTGCTTATGCTCAAATAGAAGAGGCAGTGGAGGTTGCAAAAAAAGTGGATTATGTGGTATTGGTTATGGGTTTGGATCAAAGTCAAGAGAGGGAGTCACATGATAGAGAGTACTTAGGGTTGCCAGGGAAGCAAGAAGAGCTTATTAAGAGTGTAGCTAGGGCTGCTAAGAGACCTGTTGTTGTGGTGCTTTTGTGTGGAGGCCCGGTTGATATTACTTCGGCTAAGTTTGATGATAAGGTTGGAGGAATCTTGTGGGCTGGGTACCCGGGGGAACTTGGAGGAGTGGCCCTGGCCCAGGTTGTATTTGGTGATCATAACCCAGGTGGAAAACTACCAATTACTTGGTACCCAAAAGATTTCATCAAAGTACCAATGACAGATATGAGAATGAGAGCAGATCCAGCATCAGGCTACCCTGGGAGAACCTACAGATTCTACACTGGTCCAAAGGTCTATGAATTTGGCTACGGCCTAAGCTACACAAAATATTCCTACAAGCTCCTCTCACTCTCACACAGCACCCTCCACATCAACCAATCATCCACACATTTAATGACTCAAAATTCCGAAACCATACGCTACAAGCTGGTTTCGGAGTTGGCGGAAGAAACATGCCAGACCATGTTGTTGTCGATCGCATTGGGAGTCACGAATCGTGGTAACTTGGCAGGGAAGCATCCGGTGTTGCTGTTTGTGAGGCAGGGAAAGGTGAGAAACATTAATAATGGGAATCCGGTGAAACAGTTGGTGGGGTTTCAAAGTGTGAAGGTGAATGCAGGGGAAACGGTTCAAGTGGGGTTTGAGCTAAGCCCTTGTGAGCATCTTAGCGTGGCTAATGAGGCTGGTTCGATGGTGATTGAAGAAGGGTCTTATTTGTTTATTGTTGGGGACCAAGAGTACCCAATTGAAGTCACTGTTTGA 2337 0.4887 MALPHSFATIIISFFLLNLHHHHAESTRPPYSCDSSSNSPYYSFCNTKLPITKRAQDLVSRLTLDEKLAQLVNTAPAIPRLGIPSYQWWSEALHGVADAGFGIRFNGTIKSATSFPQVILTAASFDPNLWYQISKTIGREARAVYNAGQATGMTFWAPNINVFRDPRWGRGQETAGEDPLMNAKYGVAYVRGLQGDSFEGGKLAERLQASACCKHFTAYDLDQWKGLDRFVFDARVTSQDLADTYQPPFQSCIEQGRASGIMCAYNRVNGVPNCADFNLLTKTARQQWKFDGYITSDCGAVSIIHEKQGYAKTAEDAIADVFRAGMDVECGDYITKHAKSAVFQKKLPISQIDRALQNLFSIRIRLGLFDGNPTKLPFGTIGPNEVCSKQSLQLALEAARDGIVLLKNTNSLLPLPKTNPTIALIGPNANASSKVFLGNYYGRPCNLVTLLQGFEGYAKTVYHPGCDDGPQCAYAQIEEAVEVAKKVDYVVLVMGLDQSQERESHDREYLGLPGKQEELIKSVARAAKRPVVVVLLCGGPVDITSAKFDDKVGGILWAGYPGELGGVALAQVVFGDHNPGGKLPITWYPKDFIKVPMTDMRMRADPASGYPGRTYRFYTGPKVYEFGYGLSYTKYSYKLLSLSHSTLHINQSSTHLMTQNSETIRYKLVSELAEETCQTMLLSIALGVTNRGNLAGKHPVLLFVRQGKVRNINNGNPVKQLVGFQSVKVNAGETVQVGFELSPCEHLSVANEAGSMVIEEGSYLFIVGDQEYPIEVTV 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00690 778 Pfam Glycosyl hydrolase family 3 N terminal domain 108 360 IPR001764 GO:0004553|GO:0005975
Gma13g00690 778 SUPERFAMILY (Trans)glycosidases 42 402 IPR017853 -
Gma13g00690 778 Pfam Fibronectin type III-like domain 700 770 IPR026891 -
Gma13g00690 778 Gene3D Immunoglobulins 633 778 IPR013783 -
Gma13g00690 778 PANTHER SUGAR HYDROLASE-RELATED 5 777 IPR044993 GO:0009044|GO:0045493
Gma13g00690 778 Pfam Glycosyl hydrolase family 3 C-terminal domain 403 632 IPR002772 GO:0004553|GO:0005975
Gma13g00690 778 PANTHER GLYCOSIDE HYDROLASE FAMILY 3 PROTEIN 5 777 - -
Gma13g00690 778 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 403 635 IPR036881 GO:0004553|GO:0005975
Gma13g00690 778 Gene3D - 389 632 IPR036881 GO:0004553|GO:0005975
Gma13g00690 778 Gene3D - 54 376 IPR036962 GO:0004553|GO:0005975
Gma13g00690 778 PRINTS Glycosyl hydrolase family 3 signature 115 134 IPR001764 GO:0004553|GO:0005975
Gma13g00690 778 PRINTS Glycosyl hydrolase family 3 signature 209 225 IPR001764 GO:0004553|GO:0005975
Gma13g00690 778 PRINTS Glycosyl hydrolase family 3 signature 283 301 IPR001764 GO:0004553|GO:0005975
Gma13g00690 778 SMART Fn3_like_2 698 771 IPR026891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00690 Gma-Chr13 20860088 20867786 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00690 22 778 Glycoside Hydrolase AT1G78060 63.255 0.0 995
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00690 - - gmx:100812757 1518.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00690 13 20860088 20867786 Gma13g00690 13 20860088 20867786 ECH