Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00688 ATGGCTGCTGGAGTGTATAACCAACCAATTGTTGCTTTTCAATCCCATTCTCACATCAACAATTTTAATCATCAGCAAAAGTTTAATAATTTGGTAAGACTGGTGACAAAGGACTTTATCGGCAGTAATTTCCTCTCAAGAAGGGATTGTAGAGTAATTCAATCTTTAGCATCTCAAACATCTGTGGTTGACACAGTTTCATCCCCTTCAAAAAGCAAAACTAGTGATAGAGACACTCACAAGAAATCAAATGAAGCTTCTTTAATCCTTATTCGACATGGTGAATCCTTGTGGAACGAAAAGAACTTGTTCACAGGCTGTGTTGATGTCCCTCTAAGCAAGAGGGGTATAGATGAGGCAATTGAAGCTGGCAAAAGAATTAGCAGTATTCCTGTGGATCTCATATTTACATCTGCTTTGATTCGAGCGCAGATGACAGCCATGCTTGCCATGACACAGCACCGCCGCAGGAAGGTGCCTATCATAATGCACAATGAAAGTGAACAAGCAAGGGGATGGAGTCAAGTTTTTAGTGAGGATACAGAAAAGCAATCCATTCCAGTCATAGCAGCTTGGCAATTGAATGAAAGAATGTATGGGGAACTACAGGGTCTCAATAAGCAAGAAACAGCAGACAGATATGGGAAAGAACAAGTACATGAGTGGCGTCGAAGTTATGACATACCTCCTCCAAATGGTGAAAGTTTGGAAATGTGTGCTGAAAGGGCAGTTTCCTATTTCAGAGACCAAATTGAACCTCAACTTTTATCTGGAAAGAATGTTATGATTTCAGCTCATGGGAATTCACTGAGATCCATTATTATGTATCTTGACAAACTAACTTCCCAAGAGGTGATTAGTTTAGAATTGTCAACTGGAATTCCAATGCTTTACATTTTTAAAGAAGGAAGATTCGTTAGGAGAGGGAGTCCGATAGGGCCCACTGAAGCAGGAGTTTATGCCTACACTAGGCGTTTGGCTCTTTACAGGCAGAGGTTGGATGATATGTTCCAATAA 1017 0.4041 MAAGVYNQPIVAFQSHSHINNFNHQQKFNNLVRLVTKDFIGSNFLSRRDCRVIQSLASQTSVVDTVSSPSKSKTSDRDTHKKSNEASLILIRHGESLWNEKNLFTGCVDVPLSKRGIDEAIEAGKRISSIPVDLIFTSALIRAQMTAMLAMTQHRRRKVPIIMHNESEQARGWSQVFSEDTEKQSIPVIAAWQLNERMYGELQGLNKQETADRYGKEQVHEWRRSYDIPPPNGESLEMCAERAVSYFRDQIEPQLLSGKNVMISAHGNSLRSIIMYLDKLTSQEVISLELSTGIPMLYIFKEGRFVRRGSPIGPTEAGVYAYTRRLALYRQRLDDMFQ 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00688 338 CDD HP_PGM_like 88 307 IPR013078 -
Gma13g00688 338 Pfam Histidine phosphatase superfamily (branch 1) 88 161 IPR013078 -
Gma13g00688 338 Pfam Histidine phosphatase superfamily (branch 1) 183 292 IPR013078 -
Gma13g00688 338 PANTHER PHOSPHOGLYCERATE MUTASE 1, HISTIDINE PHOSPHATASE SUPERFAMILY-RELATED 45 337 - -
Gma13g00688 338 SUPERFAMILY Phosphoglycerate mutase-like 88 304 IPR029033 -
Gma13g00688 338 Hamap 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 85 312 IPR005952 GO:0004619|GO:0006096|GO:0016868
Gma13g00688 338 Gene3D - 77 311 IPR029033 -
Gma13g00688 338 PANTHER PHOSPHOGLYCERATE MUTASE 45 337 IPR005952 GO:0004619|GO:0006096|GO:0016868
Gma13g00688 338 SMART PGAM_5 87 273 IPR013078 -
Gma13g00688 338 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 90 99 IPR001345 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00688 Gma-Chr13 20838899 20842910 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00688 K01834 - gmx:100784422 672.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00688 13 20838899 20842910 Gma13g00688 13 20838899 20842910 ECH