Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00675 ATGGGGGCATCTCTGATGCAGGACAGGGATCTGAATCAGTATAGACCATCATTATCCAACACCAGCAGGCATCTACCTTGTGGTCATAAGTTGTGTGATGTCCATTCCTTTTGCAAAGGCTCTAAGGATCCTTGCCCTTATGAAGTTCAGTATGCCTCAGCTAATACCTCAAGTTCTGGATATGTTTTTGAAGACAAACTACATTTGACATCCGATGGCAAACATGCAGAACAAAATTCTGTGCAAGCCTCTATCATTTTAGGTTGTGGAAGGAAACAAACTGGTGACTATTTACATGGAGCTGGTCCTGATGGTGTTCTAGGCCTAGGGCCTGGAAACATTTCGGTCCCAAGTTTACTGGCAAAGGCAGGACTTATTCAGAATTCCTTTTCGATTTGTCTAGATGAGAATGAATCGGGGAGAATTATCTTTGGTGATCAAGGTCATGTCACCCAACATTCTACACCATTCTTACCCATTATTGCCTACATGGTTGGAGTAGAGAGCTTTTGTGTTGGGAGCTTATGTCTCAAGGAAACTAGGTTTCAAGCACTTATTGACAGTGGATCTTCTTTCACATTTCTTCCCAATGAAGTTTATCAAAAAGTTGTAACAGAGTTTGACAAACAAGTAAATGCGTCCAGGATTGTTCTCCAAAGTTCATGGGAGTACTGCTATAATGCCAGTTCACAGGAGTTGGTTAACATTCCACCATTGAAACTCGCTTTTTCTAGGAATCAAACTTTTTTAATTCAAAATCCTATTTTTTATGATCCTGCTAGTCAGGAACAGGAATACACCATCTTTTGTTTGCCTGTAAGCCCTTCTGCTGATGACTACGCTGCCATTGGACAGAACTTCCTGATGGGTTATCGATTGGTGTTTGATCGGGAGAATCTAAGGTTTGGCTGGTCTAGATGGAATTGCCAAGATAGAGCTAGTTTCACATCACCTTCCAATGGGGGATCACCAAACCCTTTACCGGCAAATCAGCAGCAGACTGTCCCTAATGCTCGTGGTGTACCGCCTGCCATTGCTGGACACACGTCCCCCAAACCCTCTGCAGCCACACCTGGACTTGTTACTACCTCTAGGCATTCCTTAGCTTCATTGTTACTGATATGTCACCTTTGGCTTTGGTTATCTTGTTAA 1152 0.4297 MGASLMQDRDLNQYRPSLSNTSRHLPCGHKLCDVHSFCKGSKDPCPYEVQYASANTSSSGYVFEDKLHLTSDGKHAEQNSVQASIILGCGRKQTGDYLHGAGPDGVLGLGPGNISVPSLLAKAGLIQNSFSICLDENESGRIIFGDQGHVTQHSTPFLPIIAYMVGVESFCVGSLCLKETRFQALIDSGSSFTFLPNEVYQKVVTEFDKQVNASRIVLQSSWEYCYNASSQELVNIPPLKLAFSRNQTFLIQNPIFYDPASQEQEYTIFCLPVSPSADDYAAIGQNFLMGYRLVFDRENLRFGWSRWNCQDRASFTSPSNGGSPNPLPANQQQTVPNARGVPPAIAGHTSPKPSAATPGLVTTSRHSLASLLLICHLWLWLSC 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00675 383 MobiDBLite consensus disorder prediction 315 359 - -
Gma13g00675 383 Gene3D Acid Proteases 147 317 IPR021109 -
Gma13g00675 383 Gene3D Acid Proteases 4 146 IPR021109 -
Gma13g00675 383 SUPERFAMILY Acid proteases 10 311 IPR021109 -
Gma13g00675 383 Pfam Xylanase inhibitor C-terminal 179 305 IPR032799 -
Gma13g00675 383 ProSiteProfiles Peptidase family A1 domain profile. 1 305 IPR033121 -
Gma13g00675 383 Pfam Xylanase inhibitor N-terminal 12 146 IPR032861 -
Gma13g00675 383 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 8 332 - -
Gma13g00675 383 PANTHER ASPARTYL PROTEASES 8 332 IPR001461 GO:0004190|GO:0006508
Gma13g00675 383 MobiDBLite consensus disorder prediction 315 338 - -
Gma13g00675 383 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 184 195 IPR001969 GO:0004190|GO:0006508
Gma13g00675 383 CDD pepsin_like 26 306 IPR034164 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00675 Gma-Chr13 20586650 20592763 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00675 13 309 Miscellaneous Gene Families AT1G44130 22.884 2.80e-15 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00675 - - lang:109359439 491.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00675 13 20586650 20592763 Gma13g00675 13 20586650 20592763 ECH