Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00646 ATGCGCGAAGGCGACGTCGTGCCGGCGACGGCGACGGCGTCTCCGTTGCCGCCGGTGGTGGTTGCCGGCCGAAGCCGGTCGCAGGGCTTCACGACGCGGCGAGTGACTCCGGCCGCTCCAACGGCCGGATCCGCCGCCGTGGAGCGCGTTCTCCCTAATGGTGACTTCTACGCCGGGAGCTTCTCCGGCAATGTCCCGCACGGATCAGGAAAATACCTCTGGACCGACGGATGCATGTACGAGGGCGAGTGGAAGCGCGGAAAAGCCTCTGGAAAAGGCAAATTCTCATGGCCTTCAGGCGCGACTTACGAGGGCGAGTTCAAATCGGGTCGCATGGAAGGGTTCGGAACCTTCGTCGGATCCGACGGCGACACCTACCGCGGGTCGTGGAGCTCCGACAGAAAACACGGGTTCGGGCAGAAGCGTTATGTTAACGGTGACTTATACGAAGGGTCCTGGAAGCGCAACGTGCAAGACGGTCACGGCCGTTACGTCTGGAAAAACGGGAACGAGTACGTCGGGGAGTGGAAGAACGGCGTGATTAACGGCAAGGGAGCTTTACTCTGGGCAAACGGAAACCGTTACGAGGGGCTGTGGGAGAACGGCGTCCCCAAGGGTAACGGCGTTATGAAGATTCATCACCGTTTGCTCTGGGGTGATAATTTTAACGTGAAGCGGTTCTCCGTTGAAGGAAGAGGGAGCGTTAATAGCGATAAGAGTTTCCCCAGGATTTGTATTTGGGAGTCGGAGGGTGAAGCCGGTGACATCACGTGCGATATTATCGATAATGTGGAGGCGTCGATGTTTTACCGCGACGGAACGACGTCGGATTGTGAAGAGAAAGAGATGAAGAGGAACCCTTGTTGTTTCTCGAGCGAGGTGAAAAGACCTGGAGAAACAGTTTCCAAGGGGCATAAGAATTATGAGTTGATGCTTAATCTGCAATTGGGGATAAGGTACACTGTTGGGAAGGAGGCTTCGATTTTGCGGGAGCTTAAGCAGGGTGATTTTGATCCGAAGGAGAAGTTCTGGACTAGGTTTCCGACGGAGGGGTCGAAGCTTACACCGCCGCATCAGTCCGCGGAGTTTCGATGGAAGGATTACTGCCCTGTGGTTTTTAGGCATTTGAGGAAGCTGTTTCAGGTGGATCCTGCTGATTACATGTTGGCTATATGTGGAAATGATGCTCTTCGGGAGCTTTCGTCTCCCGGGAAAAGTGGAAGCATCTTCTACTTGACCCAGGATGATAGATTCATGATAAAGACAGTGAAGAAATCTGAAGTCAAGGTGCTTATTCGGATGCTTCGGAGTTATTATCAACATGTGTCTCGATATGAAAATTCACTTGTGACGAAATTCTATGGGGTGCACTGTGTCAAGCCAATTGGAGGCCAGAAGATCCGGTTCATTGTGATGGGAAATCTTTTCTGCTCTGAATATCCAATTCATAGACGATTTGATTTGAAAGGATCTTCTCATGGTCGCACCACAGATAAACCTGAGGAGGACATTGATGAAACAACCACCCTCAAGGACCTTGATCTCAACTTTGTTTTTCGTGTACAAAGAAATTGGTTCCACGAACTCATCAAGCAAATTGAGCGGGACTGTGAGTTCTTGGAAGCTGAGAAAATTATGGATTACAGTCTTTTGGTTGGCATTCATTTTCGTGATGATAATACGTGTGACAAAATGGGATTGTCACCTTTTCTTTTACGCACTGGCAATCGGGATACTTATCAGAATGAAAAGTTGATGCGTGGTTATCGCTTTCTTGAAGCAGAGCTACAGGATAGAGATCGAGTTAAATCTGGAAGgaaatcattaatcaggctaggagccaatatgcctgcaagagcagagcgagtggcccggaggagtgattttgatcaatacactactgctggaatcagccatttgaccccttatcgcagtggggagacttacgatgtcattctatactttgggattattgacattttgcaagattatgatatcagcaaaaagcttgagcatgcttacaagtccttgcaagttgactctacttcaatttctgctgttgatccaaagctatactcgaagaggtttcgtgattttgtagggagaatattcattgaagagaggtag 2127 0.4311 MREGDVVPATATASPLPPVVVAGRSRSQGFTTRRVTPAAPTAGSAAVERVLPNGDFYAGSFSGNVPHGSGKYLWTDGCMYEGEWKRGKASGKGKFSWPSGATYEGEFKSGRMEGFGTFVGSDGDTYRGSWSSDRKHGFGQKRYVNGDLYEGSWKRNVQDGHGRYVWKNGNEYVGEWKNGVINGKGALLWANGNRYEGLWENGVPKGNGVMKIHHRLLWGDNFNVKRFSVEGRGSVNSDKSFPRICIWESEGEAGDITCDIIDNVEASMFYRDGTTSDCEEKEMKRNPCCFSSEVKRPGETVSKGHKNYELMLNLQLGIRYTVGKEASILRELKQGDFDPKEKFWTRFPTEGSKLTPPHQSAEFRWKDYCPVVFRHLRKLFQVDPADYMLAICGNDALRELSSPGKSGSIFYLTQDDRFMIKTVKKSEVKVLIRMLRSYYQHVSRYENSLVTKFYGVHCVKPIGGQKIRFIVMGNLFCSEYPIHRRFDLKGSSHGRTTDKPEEDIDETTTLKDLDLNFVFRVQRNWFHELIKQIERDCEFLEAEKIMDYSLLVGIHFRDDNTCDKMGLSPFLLRTGNRDTYQNEKLMRGYRFLEAELQDRDRVKSGRKSLIRLGANMPARAERVARRSDFDQYTTAGISHLTPYRSGETYDVILYFGIIDILQDYDISKKLEHAYKSLQVDSTSISAVDPKLYSKRFRDFVGRIFIEER 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00646 708 Gene3D - 475 704 - -
Gma13g00646 708 Pfam MORN repeat 195 210 IPR003409 -
Gma13g00646 708 Pfam MORN repeat 57 79 IPR003409 -
Gma13g00646 708 Pfam MORN repeat 80 101 IPR003409 -
Gma13g00646 708 Pfam MORN repeat 149 170 IPR003409 -
Gma13g00646 708 Pfam MORN repeat 172 194 IPR003409 -
Gma13g00646 708 Pfam MORN repeat 103 125 IPR003409 -
Gma13g00646 708 Pfam MORN repeat 126 147 IPR003409 -
Gma13g00646 708 SMART PIPK_2 333 705 IPR002498 GO:0016307|GO:0046488
Gma13g00646 708 PIRSF PIP5K_plant 217 708 IPR017163 GO:0005524|GO:0016308
Gma13g00646 708 PIRSF PIP5K_plant 20 220 IPR017163 GO:0005524|GO:0016308
Gma13g00646 708 CDD PIPKc_AtPIP5K_like 307 703 - -
Gma13g00646 708 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 293 474 IPR027484 -
Gma13g00646 708 SMART morn 124 145 IPR003409 -
Gma13g00646 708 SMART morn 170 191 IPR003409 -
Gma13g00646 708 SMART morn 78 99 IPR003409 -
Gma13g00646 708 SMART morn 193 214 IPR003409 -
Gma13g00646 708 SMART morn 101 122 IPR003409 -
Gma13g00646 708 SMART morn 55 76 IPR003409 -
Gma13g00646 708 SMART morn 147 168 IPR003409 -
Gma13g00646 708 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 52 156 - -
Gma13g00646 708 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 144 214 - -
Gma13g00646 708 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 22 214 IPR023610 -
Gma13g00646 708 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 224 707 IPR023610 -
Gma13g00646 708 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 300 704 IPR002498 GO:0016307|GO:0046488
Gma13g00646 708 Gene3D - 110 154 - -
Gma13g00646 708 Gene3D - 155 215 - -
Gma13g00646 708 Gene3D - 59 109 - -
Gma13g00646 708 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 392 702 IPR002498 GO:0016307|GO:0046488
Gma13g00646 708 PANTHER PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 2 224 707 - -
Gma13g00646 708 PANTHER PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 2 22 214 - -
Gma13g00646 708 SUPERFAMILY SAICAR synthase-like 303 704 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00646 Gma-Chr13 20139465 20143638 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00646 2 707 Acyl Lipid Metabolism Gene Families AT1G21980 72.517 0.0 1083
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00646 K00889 - gmx:100810432 1467.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00646 13 20139465 20143638 Gma13g00646 13 20139465 20143638 ECH