Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00642 ATGCATCCCTTCTGCTGCGTCTCCGCCGTCTCCGACAACTCCTCCCCGGCCCCATTCGCCGCCCCCGCCATCGCCATGCCCCCTCTCCCCGGGAGATCCGACTCCGCCCCTCGCCACGCTCAGCTCCACCTCTGCCTCTCCAACGGCGGCGTAAGCGGCCGCGCGAGCCTCCCTCCGGCGCCGGCGGCGGTGGACGTCAGAATCAACGACCTCGTCGGGAACGGAATCTCGGGGATTCTACACAAGTGGGTGAACTACGGAAAAGGATGGAGGCCGCGCTGGTTCGTGCTACAAGATGGTGTTCTCTCCTACTACAAGATTCACGGTCCCGACAAGATCGTCGTCAACTCCGAAACCGAGAAGGGATCGAAAGTCATCGGCGACGAATCCGCGCGCATGATTTCTCGCAACCGCAATTCCAATCACGCCGTCAACCATCGCCGCAAGCCCCTCGGCGAAATCCATCTCAAGATTTCGACTATTCGAGAGAGCAGGTCGGATGACAAGAGGTTTTCCGTTTTCACTGGGACTAAGAGACTCCACTTGAGGGCCGACACCCGGGAGGATCGAGTGGCATGGGTGGAAGCCCTGCAGGCTGTGAAAGATATGTTTCCCCGCATTTCCAACAGTGAGCTGATGGCGCCAGTGGACAATGTGGCCGTTTCAACCGAGAAACTGAGGCATCGGCTTATGGAGGAAGGTGTAAGTGAGGCAGCTATTCAGGACACTGAGCAAATTATGAGAAATGAGTACGCTGCGCTGCAAAACCAGCTTCAGCTGCTTAAGCAGAAGCAGGTGGCGCTAATCGACACTTTGCGGCAATTAGAGACAGAAAAGGTTGATCTGGAGAACACTGTTGTTGACGAGAGCCAAAGACAGTTGAATGATCAAGAGGCTTCCTCTAGATTGAGGCAGGAGAAATCTAGTGAAGCAAGTGCAAGTGAGTCTGAGGATGATAACGAGAGAAATGATGCAGCCGAGGAAGAAACAGATGAAGATGACTCCGCTTTTTTTGACACTCGTGATTTTCTATCATCATCCAATTCTTTTAAAAGTAATGGATCTGATATTAGGGCCTCATCTTTCTCTTCAGATGATGGACTCTATACAGTTGAATCAGAGGAGGATGTAGATCCTTCAATTAAATCTGTTGGAGGCAACTATCCTTCTGTTAAACGACGTAGGAAATTGCCTGACCCTGTTGAAAAGGAGAAAGGCGTCAGTCTTTGGTCAATGATTAAGGATAATATTGGGAAGGATCTAACTAAAGTTTGCCTTCCTGTTTATTTTAATGAGCCTCTCTCATCTCTGCAAAAATGTTGTGAAGAAATGGAATATTCGTATCTTATAGACCGTGCATATGAATGGGGAAGAAGGGGTAATAGTCTCATGAGAATTCTCAATGTTGCTGCGTTTGCTATATCTGCCTATGCTTCAACTGAAGGGAGAATTTGCAAACCATTTAACCCATTACTAGGGGAAACATATGAGGCTGACTTTCCAGATAAAGGAATTCGATTTTTCTCAGAGAAGGTCAGTCATCATCCAATGATAGTAGCATGTCACTGTGAGGGTACAGGTTGGAAATTTTGGGGAGATAGCAACTTAAAGAGTAAATTTTGGGGTCGGTCAATTCAGCTTGATCCTGTTGGCATTTTGACTTTGGAATTTGATGATGGTGAAGTATTCCAGTGGAGAAAGGTTACTACATCAATATACAATCTCATATTGGGGAAGCTGTATTGTGATCATTATGGTACAATGCGTATACAGGGAAACCAAGACTACTCTTGTAATCTGAAATTCAAGGAGCAATCTATAATTGACCGGAATCCTCACCAGGTTCATGGTATTGTTCAGGATAAAAATGGGAAAATATTGTCTACATTACTCGGAAAATGGGATGACAGCATGTATTATATTAATGGAGACTACAGTGGGAAAGGGAAGGGTTATGAATCTATGTCAGATGCCCATCTACTATGGAAGCGGAGCAAGCCTCCCAAGTTTCCCACTAGATATAACTTTACTCGGTTTGCCATCACATTAAATGAACTTACCCCTGGATTAAAGGAAAAGCTGCCACCTACTGATTCCAGGTTAAGACCAGATCAGAGGCATTTGGAAAATGGGGAATATGATATGGCAAATTCAGAAAAGTTGCGGCTAGAACAGCGGCAACGCCAGGCTCGGAAAATGCAAGAGAGCGGTTGGGAACCACGGTGGTTTGGTAGGGATAAAGAAAGTGGCACCTACCGCTACTTAGGAGGGTATTGGGAGGCCCGAAAACAAGGAAATTGGAACTCTTGTCCTGACATTTTTGGCCATATTCCTTCTGATCATGTTTCAGACGAAGTGAATGTTCCCCCATGA 2373 0.4699 MHPFCCVSAVSDNSSPAPFAAPAIAMPPLPGRSDSAPRHAQLHLCLSNGGVSGRASLPPAPAAVDVRINDLVGNGISGILHKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIVVNSETEKGSKVIGDESARMISRNRNSNHAVNHRRKPLGEIHLKISTIRESRSDDKRFSVFTGTKRLHLRADTREDRVAWVEALQAVKDMFPRISNSELMAPVDNVAVSTEKLRHRLMEEGVSEAAIQDTEQIMRNEYAALQNQLQLLKQKQVALIDTLRQLETEKVDLENTVVDESQRQLNDQEASSRLRQEKSSEASASESEDDNERNDAAEEETDEDDSAFFDTRDFLSSSNSFKSNGSDIRASSFSSDDGLYTVESEEDVDPSIKSVGGNYPSVKRRRKLPDPVEKEKGVSLWSMIKDNIGKDLTKVCLPVYFNEPLSSLQKCCEEMEYSYLIDRAYEWGRRGNSLMRILNVAAFAISAYASTEGRICKPFNPLLGETYEADFPDKGIRFFSEKVSHHPMIVACHCEGTGWKFWGDSNLKSKFWGRSIQLDPVGILTLEFDDGEVFQWRKVTTSIYNLILGKLYCDHYGTMRIQGNQDYSCNLKFKEQSIIDRNPHQVHGIVQDKNGKILSTLLGKWDDSMYYINGDYSGKGKGYESMSDAHLLWKRSKPPKFPTRYNFTRFAITLNELTPGLKEKLPPTDSRLRPDQRHLENGEYDMANSEKLRLEQRQRQARKMQESGWEPRWFGRDKESGTYRYLGGYWEARKQGNWNSCPDIFGHIPSDHVSDEVNVPP 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00642 790 MobiDBLite consensus disorder prediction 288 338 - -
Gma13g00642 790 SUPERFAMILY PH domain-like 76 206 - -
Gma13g00642 790 SMART PH_update 74 204 IPR001849 -
Gma13g00642 790 Coils Coil 244 292 - -
Gma13g00642 790 Gene3D - 494 668 - -
Gma13g00642 790 Pfam Pleckstrin homology domain 81 198 - -
Gma13g00642 790 SUPERFAMILY Oxysterol-binding protein-like 403 786 IPR037239 -
Gma13g00642 790 Pfam Oxysterol-binding protein 408 763 IPR000648 GO:0008289
Gma13g00642 790 Gene3D - 705 768 - -
Gma13g00642 790 CDD PH_ORP_plant 76 209 - -
Gma13g00642 790 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 2 780 IPR000648 GO:0008289
Gma13g00642 790 ProSiteProfiles PH domain profile. 73 202 IPR001849 -
Gma13g00642 790 MobiDBLite consensus disorder prediction 299 319 - -
Gma13g00642 790 Gene3D - 74 204 IPR011993 -
Gma13g00642 790 MobiDBLite consensus disorder prediction 320 336 - -
Gma13g00642 790 PANTHER OSBP(OXYSTEROL-BINDING PROTEIN)-RELATED PROTEIN 1C 2 780 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00642 Gma-Chr13 20045203 20052317 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00642 K20456 - gmx:100812036 1541.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00642 13 20045203 20052317 Gma13g00642 13 20045203 20052317 ECH