Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00638 ATGGCATTGCATCTTCAAACGATCTTACCATTCATTTTGGTTCTAGCAATAATTTTATCAGGGCAAAGAACATGTGACAGTGCTAGAGTTTTCACCATAGTAAACTACTGCAAGGAGACACTTTGGCCGGCGGTGACACCCGGGGAAAGCTTCAACGGCGGTGGCTTCGTCCTAAAACCGGGCGAATCCGCGGTTTTCACGGCCCCGGTTAGCTGGAGCGGCCGGATATGGGCTCGAACCGGTTGCAAGTTCGACCAAAACGGAAACGGAAATTGCCAAACCGGTTCATGCGGCACAACCCTAAAATGCTCAGCCTCGGGGAAAACACCGGCGTCGCTAGCAGAGTTCACACTAGCGCAACCGGACTTCTACGACGTGAGCCTCGTCGACGGCTTCAATGTGCCGATGGCCGTTAAGCCCATAAACGGAAAGGGAAACTGCAGCACCGCTGGATGTGATTCTGACCTTAGAAACAGTTGCCCCAAGGAACTTTCCCTTAGGGCTAACGGCAAGACCGTTGGGTGTCGTAGTGCATGTGATGTGTTTAACACTGATGAGTATTGCTGCAAAGGGAATTATGGAAACCCTTCTACTTGCAAGCCTACGTTTTATTCCAAGAAGTTTAAGGAGGCGTGCCCTACTTCTTATAGCTATGCTTATGATGATCCAACTAGTATTTTTACTTGTACAGGGACGGATTATGTCATAGCCTTCTGCTCATCCAGGAAACAACAGGTATGCTCTTATCATAATAACAAGCTTCACTGCAGTGGATCACAAGGGTTGAAATCGTTGACTGGAAGGTGGTGGATCGTGATGATGATAACAGTGTTTTCGGTGCTTAGTTTTTGGATTGGATTCTAG 864 0.4815 MALHLQTILPFILVLAIILSGQRTCDSARVFTIVNYCKETLWPAVTPGESFNGGGFVLKPGESAVFTAPVSWSGRIWARTGCKFDQNGNGNCQTGSCGTTLKCSASGKTPASLAEFTLAQPDFYDVSLVDGFNVPMAVKPINGKGNCSTAGCDSDLRNSCPKELSLRANGKTVGCRSACDVFNTDEYCCKGNYGNPSTCKPTFYSKKFKEACPTSYSYAYDDPTSIFTCTGTDYVIAFCSSRKQQVCSYHNNKLHCSGSQGLKSLTGRWWIVMMITVFSVLSFWIGF 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00638 287 Pfam Thaumatin family 35 239 IPR001938 -
Gma13g00638 287 Gene3D Thaumatin 30 239 IPR037176 -
Gma13g00638 287 CDD TLP-PA 30 239 - -
Gma13g00638 287 SUPERFAMILY Osmotin, thaumatin-like protein 30 240 IPR037176 -
Gma13g00638 287 PIRSF PR5 1 283 IPR001938 -
Gma13g00638 287 SMART tha2 31 240 IPR001938 -
Gma13g00638 287 PRINTS Pathogenesis-related protein signature 30 42 IPR001938 -
Gma13g00638 287 PRINTS Pathogenesis-related protein signature 54 63 IPR001938 -
Gma13g00638 287 PRINTS Pathogenesis-related protein signature 75 86 IPR001938 -
Gma13g00638 287 PRINTS Pathogenesis-related protein signature 88 117 IPR001938 -
Gma13g00638 287 PRINTS Pathogenesis-related protein signature 122 138 IPR001938 -
Gma13g00638 287 PRINTS Pathogenesis-related protein signature 230 239 IPR001938 -
Gma13g00638 287 ProSiteProfiles Thaumatin family profile. 28 239 IPR001938 -
Gma13g00638 287 PANTHER OS03G0233200 PROTEIN 10 254 IPR001938 -
Gma13g00638 287 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 10 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00638 Gma-Chr13 19962730 19964531 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00638 9 239 Receptor kinase-like Gene Family AT5G38280 43.673 3.21e-55 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00638 - - gmx:100813659 612.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00638 13 19962730 19964531 Gma13g00638 13 19962730 19964531 ECH