Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00631 ATGAGACCCGCGGTTGAAGGATCCATGGCCGAGAGGTTTGACGACGGCGAAAAGGAGAAGAAGAAGAAGAAGCGCCGATCCAATCGACGATCCAAGCAAAACCCTCCCTCATCTTCAGCATCTGAAGTGAATGAGGCCCAGGGGTTGTCACCAGATTCAGGGAAAATTGGAACACCTACTCATGCTTCTCCATCCTTGGGCAATTCATTGAACCAGGTCAATGTGTGTTCTTCTAATGAGCAAGGATTATCCAAAGCATCAAATGTTGCTTTTATTTCGATACCTCCCATGCATATCAATGAGCAAGTGGAACCTGGTGATTTGCGAATTTTGCCAATGTGTGGTGGAGGTATTGATTCAAATTCATTTTCTGAGCCCACTGGTTGCAGAGGGTCATCTGGAATTAATAAAAACAAGGACTCAGTACCTTGTGGTCAAATTGGGCTTTGTGGCCAGGAAAAATATTTTAGTCCACACTGGTCTGTAGAGGCTGTTGAGAAGGAATTAGAGGAGGGTGATGTTTTTAAAGCTCTCTTTCATGTCAATGCTCACAATAGACTCGAGGCATACTGCAAAATTGATGGAATGCCAACTGATGTTTTCATTGGTGGGATTCCAGCCCAGAATAGAGCTGTGGAAGGTGATGTCGTTGCAGTCAAGTTTGATCCCTTGCCATTGTGGACAAAAATGAAAGGACCAAACGGGTCTTGTAACAACACTGCAACACCAGAAGGTTGCAACCTTACAGAAGATAAAGAAGTGGGCGGTAATATTTGTAAAGGGAAAGCTAAAGTAGATGCTGAGTATGAGTCTGCTCATGGCAGAAGCTATCCTGGTCAAAACAAGGAGGATGCTGATCAAAACTCCTTGTATAAAAGTTATCCTTTTACTGAAACAACAATGGTCTATGATGATATTACCTCCCGGGGTTCTACTAATCATTTAGATCTACATGGAATGGCCAACCATGACAGCATTAATGGTCATCACTGTGCTGCTCCTAATTCCTTAAAGATCAATTCTTGTAGTGGGCAGAGCAATGCAGTGGAAAAGATGTGTTTGTTGGTTAACTCTTTCCCTTCTAAAAGACCAACTGGCAGGGTGGTTGCTATTATTGAGAGATCTCCACGTCGAGAGGGTATTGTTGGTCACATTAATGTGAAGCAGTGGGTTTCTTTCAGGGACACAAGCAAAAAGGATGTGAAGAAGAATAAGAATTTGATTTCTGAGCATGAATACATCCAACTGATACCAACTGATCCAAAGTTTCCAAATATGATGCTTCTTGTTAGAAAGTTACCAAAGTGCATTAAGAAAAGAATGAAAAGTGGTGATGTGACAATCCAAATGGATCTGGTAGCTGTACAAATTGATGATTGGGTTGAAGAAAGTCCTTTTCCCGAGGCTCACATTTTGCGTGTTTTTGGACAAGGTGGTGAAGTTCAGACCCAGTTAGATGCAATTTTGTTTCAGAATGCTATCTGTTTGTCTGAATTTTCACCTGAAGCTCTGTCCTGTCTGCCATGTGTTCCTTGGGAGATTCCACTGAAGGAAATTCAAAGTAGAATAGATCTGAGAAATTTGTGCATATTTACTATCGATCCTTCGACTGCCACTGATCTGGATGATGCACTGTCAATTGAGAAGTTGCCTAATGGAAATTATAGAGTAGGTGTCCACATTGCTGATGTATCATATTTTGTTTTACCTGACACAGCCTTGGATAATGAGGCTAAGTTTAGGTCAACAAGTGTCTATATGTTGCAAAGAAAGTTACCTATGCTGCCTGCATTATTGTCAGAGAATATCGGTTCACTTAGTCCTGGAGTGGATCGGCTTGCAGTATCCATGCTCCTGGATATAAATGTTGCAGGAGATGTTGTAGACCGTTGGATTGGTCGTACTGTCATACAGTCTTGTTGTAAGCTTTCATATGAACATGCTCAGGACATCATTGACAAGGCTTTTGATTTTGAGGGTTCAAATTTCATTGAAGATGGCTATCCTAGAGTGTATGGCCATTTTGAATGGCCTGATGTTATTATGTCTTTGGAGAGTCTTTATGAAATTTCAAATGTCTTGAAACAGAAGAGGTTTACTGATGGGGCTCTACGGCTTGAAAACCCCAAAGTTGTTATCTTGTTTGATGAAAATGGAGTTCCTTACGATAGTAGGCTTTCTGAAAGGAAAGAATCAAATTTTCTTGTTGAGGAATATATGCTTTTGGCCAATAGAATTGCAGCTGAAGTCATATGTAGAGCTTATCCTGATGGTGCATTGTTGAGGAGGCATCCTGAACCTAATATGCGGAAGCTGAGAGAGTTCATGGCATTTTGTCAGAAACATGGTTTAGAATTGAACACGTCTTCATCTGGTGAGTTACATTGGTCGTTAGAGCAGATCAGGGAAAAGCTTAAGGGTGATCCTGTGCTTTACAATATACTTATTTCTTATGCTACAAGGCCAATGCAGTTGGCATCTTACTTCTGTAGTGGAGATTTAAAGGACAGTGAAAATGAATGGGGTCATTATGCTTTGGCCGTCCCATTTTACACTCATTTCACATCACCTCTGCGTCGGTATCCAGATATTATTGTTCACCGGACACTACTTGCTACTATAGAGGCTGAGGAGTTGTATATGAAGCATCAGAAGGCTTTGCAGGGTTCCAAGGAAGTAAAAGTGCAAAAAAGATGTTTCACAGGCATTAATTTTGATAAAAGTGCTGCAGAATCCACGGAAGGTAGGGAAGCACTGTCAGCTGCAGCTGTGAAGCATAGTGTTCCATGTGCCGAAACACTTGCAGATATTGCTACTTATTGCAATGGGAGAAAGCTAGCTAGTAGAAACGTTAAGGATGCCTGTGATAAACTTTACATATGGTTTCTCCTGAAGAAAAAGGAGGTTTTATTGTCAGAAGCAAGAATACTGGGACTAGGCCCAAGATTCATGTCAATTTATATTCAAAAGCTAGCTATTGAGCGACGCATATATTATGATGAAGTTCAAGGTTTGACTGTGGAGTGGCTTGAGACAACATCCACTTTGGTGCTTAGCATGTCTACTAATAAGTGTGCATATAGGAGGGGCTGCCCTAACAAGTTGAGGCCATTTGAAGAAGTTGCATTGCTTACTTGTCCATATAACCTGGATTTTACCACGGATAATTCTAACCCAAGTGAAGTAATGAAAGTGGATGATAGTATATCTGCCATGGACAGGGAGCCCATTTCAAGATCAGACGCATTGGAAACTTTAATTGACCCTGCATTTTTCCCACTCACAGTACGTCTTCTTTCAACAATTCCAGTAGCACTTCATGCTGTTGGTGGTGATGATGGGCCCCTTGATATTGGTGTGAGGCTGTACATGAGCTCCTATATTGGTTTCGGCAAAAATTTCACTTCATGGTCATGGAAGAGGAGGGTGGTGGTGCTTATAAAAGATCTAGGGTAA 3456 0.4141 MRPAVEGSMAERFDDGEKEKKKKKRRSNRRSKQNPPSSSASEVNEAQGLSPDSGKIGTPTHASPSLGNSLNQVNVCSSNEQGLSKASNVAFISIPPMHINEQVEPGDLRILPMCGGGIDSNSFSEPTGCRGSSGINKNKDSVPCGQIGLCGQEKYFSPHWSVEAVEKELEEGDVFKALFHVNAHNRLEAYCKIDGMPTDVFIGGIPAQNRAVEGDVVAVKFDPLPLWTKMKGPNGSCNNTATPEGCNLTEDKEVGGNICKGKAKVDAEYESAHGRSYPGQNKEDADQNSLYKSYPFTETTMVYDDITSRGSTNHLDLHGMANHDSINGHHCAAPNSLKINSCSGQSNAVEKMCLLVNSFPSKRPTGRVVAIIERSPRREGIVGHINVKQWVSFRDTSKKDVKKNKNLISEHEYIQLIPTDPKFPNMMLLVRKLPKCIKKRMKSGDVTIQMDLVAVQIDDWVEESPFPEAHILRVFGQGGEVQTQLDAILFQNAICLSEFSPEALSCLPCVPWEIPLKEIQSRIDLRNLCIFTIDPSTATDLDDALSIEKLPNGNYRVGVHIADVSYFVLPDTALDNEAKFRSTSVYMLQRKLPMLPALLSENIGSLSPGVDRLAVSMLLDINVAGDVVDRWIGRTVIQSCCKLSYEHAQDIIDKAFDFEGSNFIEDGYPRVYGHFEWPDVIMSLESLYEISNVLKQKRFTDGALRLENPKVVILFDENGVPYDSRLSERKESNFLVEEYMLLANRIAAEVICRAYPDGALLRRHPEPNMRKLREFMAFCQKHGLELNTSSSGELHWSLEQIREKLKGDPVLYNILISYATRPMQLASYFCSGDLKDSENEWGHYALAVPFYTHFTSPLRRYPDIIVHRTLLATIEAEELYMKHQKALQGSKEVKVQKRCFTGINFDKSAAESTEGREALSAAAVKHSVPCAETLADIATYCNGRKLASRNVKDACDKLYIWFLLKKKEVLLSEARILGLGPRFMSIYIQKLAIERRIYYDEVQGLTVEWLETTSTLVLSMSTNKCAYRRGCPNKLRPFEEVALLTCPYNLDFTTDNSNPSEVMKVDDSISAMDREPISRSDALETLIDPAFFPLTVRLLSTIPVALHAVGGDDGPLDIGVRLYMSSYIGFGKNFTSWSWKRRVVVLIKDLG 1151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00631 1151 SUPERFAMILY Nucleic acid-binding proteins 365 494 IPR012340 -
Gma13g00631 1151 Pfam RNB domain 522 874 IPR001900 GO:0003723|GO:0004540
Gma13g00631 1151 SUPERFAMILY Nucleic acid-binding proteins 483 966 IPR012340 -
Gma13g00631 1151 ProSitePatterns Ribonuclease II family signature. 843 867 IPR022966 -
Gma13g00631 1151 PANTHER DIS3-LIKE EXONUCLEASE 2 24 1127 - -
Gma13g00631 1151 SMART RNB_2 522 876 IPR001900 GO:0003723|GO:0004540
Gma13g00631 1151 SUPERFAMILY Nucleic acid-binding proteins 154 374 IPR012340 -
Gma13g00631 1151 Gene3D - 150 244 - -
Gma13g00631 1151 MobiDBLite consensus disorder prediction 32 68 - -
Gma13g00631 1151 MobiDBLite consensus disorder prediction 1 68 - -
Gma13g00631 1151 MobiDBLite consensus disorder prediction 7 21 - -
Gma13g00631 1151 Hamap DIS3-like exonuclease 2 [DIS3L2]. 18 1104 IPR028591 GO:0000175|GO:0034427
Gma13g00631 1151 Gene3D - 396 480 - -
Gma13g00631 1151 Pfam Dis3-like cold-shock domain 2 (CSD2) 413 492 IPR041505 -
Gma13g00631 1151 PANTHER RIBONUCLEASE 24 1127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00631 Gma-Chr13 19868878 19875489 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00631 K18758 - gmx:100815252 2267.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00631 13 19868878 19875489 Gma13g00631 13 19868878 19875489 ECH