Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00623 ATGGCCACTCCACAGTCCCACTTCCGTTTTCTCGCTTTCTCACTCTCTATCATCCATATCTCTCTCTTCCTCTCCACAACCGCAACCCAACAACCGCTCCTCGAAGAACAAGACACTCCCATCACGCACTTCCAGCGCTACCTCCGCATTAACACAGCCCACCCAACGCCTGACTACACCTCCGCGGTCTCCTTCCTCAAAGCCCAGGCCCAAAGCCTGGGCCTCAAAACCCAAACCCTCGAGTTCGTCCAAGGCAAGCCCGTCCTCCTCCTCACGTGGCCGGGCTCAAACCCCTCCCTCCCCTCCCTCCTTCTCAACTCCCACCTCGACTCCGTCCCCGCCGAGCCCGAGAAATGGCTCCACAATCCCTTCTCCGCCCACCGCACCGCCTCCGGCGCCATCTTCGCCCGCGGCGCCCAGGACGACAAATGTATCGCTATTCAGTACCTGGAAGCCATCCGCAACCTCAAATCCCAATCCTTCACTCCACACCGCACAATCCACATCTCCCTCGTCCCCGACGAGGAAATCGGCGGCATCGACGGGGCCGCCAAGTTCGTGGAGTCCGAGGAATTCAACGGACTCAACGTTGGATTCGCGCTCGACGAGGGGCAGGCCTCGCCGGGCGATGAATTTAGGGTTTTCTACTCCGATAGGGTTCCGTGGAACGTGAAGATTAGGGCTAAGGGGAGGCCCGGGCATGGGTCGAGGATGTATGATGGGAGTGCGGTGGAGAATTTGATGGAGAGCGTGGAGGTAGTGAGTAGGTTCAGGGAGAGCCAGTTTGATGTGGTGAAGGCCGGGAAAGCTTTGAATGGTGAGGTTGTGTCGGTGAATCCGGTTTATGTCAAGGCTGGGGTTGTTTCTGAAGATGGGTTTGCAATGAACGTCCAGCCTTCGGAGGCGGAAGCTGGGTTCGATCTGAGGCTGACACCAACAACAGACCCAGAGGAAATGAGAAGGCGAATTGCAGAGGAATGGGCGCCGGCTGTTAGGAATATGTCATACGAGATTATAGAGAAAGGACCTCTTAGAGACTACATGGGACGTCCGTTAATGACTGCAACCGATGATTCCAATCCATGGTGGTCAGTTTTCAAGCAAGCTATCACATCTGTTGGAGAAAAGCTTTCAAGGCCTGAAATTCTTGCATCCACAACTGATGCTCGATACCTCAGACAGAAAGGAATTCCTGTGCTCGGTTTCTCCCCAATGAAAAATACTCCCATCTTGCTTCATGACCACAATGAGCACTTAAAGGATACTGTGTTCATGAAGGGAATTCAGGTATACGAGTCTCTGATAAGTTCCTTGAGTACATTTACAGAAGCTTCACATTAA 1341 0.5384 MATPQSHFRFLAFSLSIIHISLFLSTTATQQPLLEEQDTPITHFQRYLRINTAHPTPDYTSAVSFLKAQAQSLGLKTQTLEFVQGKPVLLLTWPGSNPSLPSLLLNSHLDSVPAEPEKWLHNPFSAHRTASGAIFARGAQDDKCIAIQYLEAIRNLKSQSFTPHRTIHISLVPDEEIGGIDGAAKFVESEEFNGLNVGFALDEGQASPGDEFRVFYSDRVPWNVKIRAKGRPGHGSRMYDGSAVENLMESVEVVSRFRESQFDVVKAGKALNGEVVSVNPVYVKAGVVSEDGFAMNVQPSEAEAGFDLRLTPTTDPEEMRRRIAEEWAPAVRNMSYEIIEKGPLRDYMGRPLMTATDDSNPWWSVFKQAITSVGEKLSRPEILASTTDARYLRQKGIPVLGFSPMKNTPILLHDHNEHLKDTVFMKGIQVYESLISSLSTFTEASH 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00623 446 ProSitePatterns ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 139 178 IPR001261 -
Gma13g00623 446 Gene3D Zn peptidases 33 223 - -
Gma13g00623 446 SUPERFAMILY Bacterial exopeptidase dimerisation domain 222 335 IPR036264 -
Gma13g00623 446 Gene3D - 360 440 - -
Gma13g00623 446 PANTHER AMINOACYLASE-1 25 444 - -
Gma13g00623 446 Gene3D - 224 332 - -
Gma13g00623 446 PIRSF ACY-1 30 443 - -
Gma13g00623 446 CDD M20_AcylaseI_like 38 439 - -
Gma13g00623 446 SUPERFAMILY Zn-dependent exopeptidases 37 439 - -
Gma13g00623 446 Pfam Peptidase family M20/M25/M40 104 436 IPR002933 GO:0016787
Gma13g00623 446 TIGRFAM Ac-peptdase-euk: N-acyl-L-amino-acid amidohydrolase 35 440 IPR010159 GO:0004046|GO:0005737|GO:0006520
Gma13g00623 446 Pfam Peptidase dimerisation domain 222 326 IPR011650 -
Gma13g00623 446 PANTHER PUTATIVE-RELATED 25 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00623 Gma-Chr13 19769513 19777789 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00623 K14677 - gmx:100817383 864.374
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00623 13 19769513 19777789 Gma13g00623 13 19769513 19777789 ECH