Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00610 ATGACTCCCTACATTTTTGGAGTCGTCGTCCCTCTCTTAGTCACTCTCATCATCCGCAACAACTCCAACCCCAAACGACGTCGCGGCGTCCCGGTCGAAGTCGGGGGCGAACCCGGTCTAGCAATCCGGAACCGCCGGTTCGAGGCCCCGGTCCAGAGCGCGTGGGAGGGGGTCGCCACGCTGGCGGAGCTCTTCGAAGAAGCCTGCAAGACGCACGCGGAGAGGCTCCTGCTCGGCACGCGCGGGGTGCTGCAGAGGGAAGTGGAGACCGGCCAAGACGGCAGGTCGTTTGAGAAGCTTCACTTGGGGGACTACGACTGGCTCTCGTACGACAGAGTGTTCGATGTCGTTTCGGGGTTTGCGTCGGGGCTGGCTTGCATCGGCCATGTGAGGGAAGAACGCGCCGCCATCTTCGCCGACACGCGCCAGGAGTGGTTCATGGCGCTCCAGGGTTGTTTCAGGCGAAATGTGACAGTTGTGACTATGTATGCATCATTGGGAGAGGAAGCTTTATGTTACTCATTGAATGAGACAGAGGTTACAACAGTGATTTGTGGGAAAAAAGAATTGAGAACACTTGTGAACATTAGTGGACAACTAGACTCAGTGAAACGTGTGATATGCATGGATGATGATATCCCATCTGATGCCTCTTCGATTGCATATGACTGGACAATCACTTCCTTTGCTGAGGTTGTGAAACTTGGCAGAGAAAATCCTGTTGATGCTGATTTACCTCTTTCAGCAGATGTTGCTGTTATAATGTATACAAGTGGAAGTACAGGATTACCTAAGGGTGTGATGATGACACATGGCAATGTCTTAGCTACACTCTCTGCTGTGATGACCATTGTTCCTGACATTGGGACAAAGGATATATATCTTGCATACTTACCGATGGCTCATATCTTAGAATTAGCAGCTGAGGTAAATGCAACAGGAGGATTGCCAAAGAAGTTGTTTCATTTAGCCTACGCGCGGAGGTTGCAAGCAGTTAATGGTAGTTGGTTTGGAGCTTGGGGCTTGGAAAAGGCTCTTTGGGATTTTCTTGTGTTCAGAAAGGTCCGAGCAATTCTGGGTGGTCGTATCCGTTTTATCTTGTCCGGTGGTGCTCCCCTTTCTGGTGATACCCAGAAGTTCATCAATATTTGTCTTGGTGCTCCAATCGGTCAAGGATATGGTCTTACAGAGACTTGTGCTGGTGGGACATTCTCTGATGTTGATGATACATCTGTCGGCCGTGTTGGACCACCTCTTCCATGCTCATTTATTAAGCTAATAGACTGGCCTGAAGGTGGATATTTAATCAATGACTCACCAATGGCCCGTGGTGAAATTGTAATTGGAGGTCCAAATGTCACTCTCGGGTATTTCAAAAACGAAGAAAAAACAAAAGAATCATACAAGGTTGATGAAAGAGGAATGAGGTGGTTTTACACTGGTGACATTGGGAGAGTTCATCCAGATGGATGCCTTGAAATCATTGATCGTAAAAAGGACATTGTTAAACTACAGCACGGAGAATATGTCTCCTTGGGAAAGGTTGAGGCAGCTCTTATTGTTAGCCCCTTCGTGGACAATATTATGGTTCATGCTGATCCTTTCCATAGTTACTCTGTGGCACTTGTGGTGGGTTCTCAGTCCACATTGGAAGAATGGGCTTCAGAAAAAGGAATTTCTTCTTCCAATTTTTCAGAACTTTGCACGAAAGAAGAAACTCTGAAGGAAGTGCATGCATCACTTGTAAAGGAAGGACAGAAGGCTCGTTTGGAGAAATTTGAGATTCCTGCAAAAATTAAATTGCTTTCTGATCCATGGACTCCTGAATCTGGCCTAGTCACTGCTGCTCTCAAACTCAAGAGAGAGGCCATAAAAAAGACTTTTGATGAAGAACTTTCTGAGTTGTATGCTTCATAG 1917 0.4716 MTPYIFGVVVPLLVTLIIRNNSNPKRRRGVPVEVGGEPGLAIRNRRFEAPVQSAWEGVATLAELFEEACKTHAERLLLGTRGVLQREVETGQDGRSFEKLHLGDYDWLSYDRVFDVVSGFASGLACIGHVREERAAIFADTRQEWFMALQGCFRRNVTVVTMYASLGEEALCYSLNETEVTTVICGKKELRTLVNISGQLDSVKRVICMDDDIPSDASSIAYDWTITSFAEVVKLGRENPVDADLPLSADVAVIMYTSGSTGLPKGVMMTHGNVLATLSAVMTIVPDIGTKDIYLAYLPMAHILELAAEVNATGGLPKKLFHLAYARRLQAVNGSWFGAWGLEKALWDFLVFRKVRAILGGRIRFILSGGAPLSGDTQKFINICLGAPIGQGYGLTETCAGGTFSDVDDTSVGRVGPPLPCSFIKLIDWPEGGYLINDSPMARGEIVIGGPNVTLGYFKNEEKTKESYKVDERGMRWFYTGDIGRVHPDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALIVSPFVDNIMVHADPFHSYSVALVVGSQSTLEEWASEKGISSSNFSELCTKEETLKEVHASLVKEGQKARLEKFEIPAKIKLLSDPWTPESGLVTAALKLKREAIKKTFDEELSELYAS 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00610 638 PANTHER BACTERIAL LONG-CHAIN FATTY ACID COA SYNTHETASE 309 637 - -
Gma13g00610 638 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 15 309 - -
Gma13g00610 638 SUPERFAMILY Acetyl-CoA synthetase-like 57 636 - -
Gma13g00610 638 Pfam AMP-binding enzyme 103 505 IPR000873 -
Gma13g00610 638 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 309 637 - -
Gma13g00610 638 ProSitePatterns Putative AMP-binding domain signature. 254 265 IPR020845 -
Gma13g00610 638 Gene3D - 50 497 IPR042099 -
Gma13g00610 638 PANTHER BACTERIAL LONG-CHAIN FATTY ACID COA SYNTHETASE 15 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00610 Gma-Chr13 19354775 19364107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00610 149 637 Acyl Lipid Metabolism Gene Families AT1G77590 67.642 0.0 738
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00610 K01897 - ini:109179419 907.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00610 13 19354775 19364107 Gma13g00610 13 19354775 19364107 ECH