Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00609 ATGTCTCTAATGGAGTTTCCTAGCATCATTACCTTGTTTCACATTAAACTTGTGTCTTCTCTTGTGTTTTTATCTATTTTTACCACAACACTGAACCCTATAATTGCCGCCAAAGATTGTGTTTTCCCTGCCATCTTTAGCCTTGGTGCCTCAAACGCTGACACCGGTGGCATGGCTGCTGCTGCCTTCTCGTTACCAAATTCACCAAATGGAGAGACCTATTTTCATAGACCTTCTGGAAGGTTCAGCGATGGCCGAATCATTCTTGATTTCATAGCTGAGAGTTTTGGAATCCCTTATCTCAGTCCATATCTTGATTCACTGGGGTCCAACTTCTCACGTGGTGCAAACTTTGCAACATTTGGATCCACAATCAAACCCCAACAAAATATTTTTCTTAAGAATTTATTAAGTCCTTTCAACCTTGGAGTACAATACACTCAATTCAACGGTTTTAAACCCAAAACGCAGTTAATTAGAAATCAAGGTGGGACATTTGCATCACTGATGCCCAAAGAAGAATACTTTACTGAAGCTTTATACACATTTGATATTGGCCAAAATGATCTTATGGCTGGCATTTTCAGTAAGACTGTACCACTAATCACTGCATCCATACCTGATCTAGTCATGACTTTCAAATTAAATATCAAGAACTTATACAATTTGGGAGCTAGATCATTTTGGATACACAACACAGGACCCATTGGTTGTCTCCCTTTAATTTTGACCAATTTTCCACTCGCAATAAAGGATGCTAGTGGTTGTGTAAAGGAATATAATGAGGTGGCTCAAGATTTTAACCGGCATTTGAAGGATGCCTTAGCAAAACTTCGTGAGGACCTTCCATTGGCTGCAATCACATATGTAGATGTCTATACTCCCAAGTATAATTTATTTAGCGATCCAAAGAAATATGGATTTGAGCTCCCACATGTTACTTGTTGTGGCTATGGAGGGAAGTACAATTTTAACGATGTTGCTCGATGTGGAGCAACCATGAAGGTCATGAACAAAGATATTCTAGTGGGTTCATGTAAAACACCATCTACTAGAGTGGTATGGGATGGAATCCACTACACTGAAGCAGCTAACAAGGTTATCTTTGATCAAATCTCTAGTGGGAATTTCACAGATCCACCCATTCCCTTGAAAATGGCATGCAATAGAAATTTGGCGTGA 1182 0.3942 MSLMEFPSIITLFHIKLVSSLVFLSIFTTTLNPIIAAKDCVFPAIFSLGASNADTGGMAAAAFSLPNSPNGETYFHRPSGRFSDGRIILDFIAESFGIPYLSPYLDSLGSNFSRGANFATFGSTIKPQQNIFLKNLLSPFNLGVQYTQFNGFKPKTQLIRNQGGTFASLMPKEEYFTEALYTFDIGQNDLMAGIFSKTVPLITASIPDLVMTFKLNIKNLYNLGARSFWIHNTGPIGCLPLILTNFPLAIKDASGCVKEYNEVAQDFNRHLKDALAKLREDLPLAAITYVDVYTPKYNLFSDPKKYGFELPHVTCCGYGGKYNFNDVARCGATMKVMNKDILVGSCKTPSTRVVWDGIHYTEAANKVIFDQISSGNFTDPPIPLKMACNRNLA 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00609 393 Coils Coil 257 277 - -
Gma13g00609 393 CDD SGNH_plant_lipase_like 43 376 IPR035669 -
Gma13g00609 393 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 13 392 - -
Gma13g00609 393 Pfam GDSL-like Lipase/Acylhydrolase 45 372 IPR001087 GO:0016788
Gma13g00609 393 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 13 392 - -
Gma13g00609 393 Gene3D SGNH hydrolase 34 375 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00609 Gma-Chr13 19331985 19334411 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00609 43 379 Acyl Lipid Metabolism Gene Families AT4G10950 26.211 6.35e-30 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00609 - - gsj:114381660 712.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00609 13 19331985 19334411 Gma13g00609 13 19331985 19334411 ECH