Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00601 ATGAATGCTATAGCCACTGCTTCTGCTCTCTCTCTTCCGATTTTTCTTAGAGCTGGGAAGCTTGACACCAAAAGGGATTTGAAAGGTAGATTTAGAGTGTTTGCTGTATTTGGAGAAGAAGAGAAGAAAAATGCATGGGGTGCGCTTTTTGATGTTGAGGATCCGAGATCTAAGTTTCCACAGAATAAAGGGAAGGTTTTGGATATATCTCAAGCACTAGAAGTGGCAAGACATGATATTCAGTACTTAGATTGGCGAGCTCGGCAAGATGTGCTAACAATCATGCACCTCCATGAAAAGGTGGTCGAAGTTCTTAATCCTCTAGCTCGCGAATATAAATCAATTGGCACCCTGAAAAAGGAGCTAGCCGAGTTGCAGGATGAATTAGCACAAGCACACACACAGGTTCATATATCTGAAGCAAGGGTTACCACTGCTTTAGATAAACTTGCTTACATGGAAGAATTGGTAAATGATAGGCTGTTGCAAGATCGAAGCACGACTGATGTTGCCCAAACATCCTCTTCTCCCAGTACTTCTGCAAATTCTTTAGTTACAGAAAAGAGAAGGCAGCCACGGAAAAGCTTGAATGTATCGGGTCCAGTTCAGTCATACCATCCCCATTTGAAGAATTTCTGGTATCCTGTTGCTTTTTCTAATGACCTAAAGGATGATACCATGATCCCAATAGAATGTTTTGAGGAACCATGGGTTATCTTTCGAGGGAAAGATGGGAAGCCTGGATGTGTGCAGAACACCTGTGCACATAGAGCCTGCCCTCTGCACCTTGGTTCAGTAAATGAGGGTCGTATCCAATGTCCCTACCATGGCTGGGAATATACTACTGATGGAAAATGTGAGAAAATGCCATCTACTCGACAGCTAAATGTGAAAATAAAGTCAGTTCCATGCTTTGAAAAGGAGGGAATGATCTGGATTTGGCCTGGCAATGACCCCCCAGCAGCCACACTTCCATCTATACTACCTCCTTCTGGATTTGAAATCCATGCTGAGATTGTGATGGAACTTCCAATTGAACACGGTTTACTTTTGGACAATCTTTTGGATCTTGCACATGCCCCTTTTACTCACACCTCAACATTTGCTAAGGGATGGAGTGTTCCCAGCTTGGTGAATTTTTTGACACCTGCATCTGGCCTGCAAGGATACTGGGATCCCTATCCTATTGATATGGAGTTTCGACCACCTTGCATGGTACTATCAACCATTGGAATTTCAAAGCCTGGGAAACTGGAGGGACAAAGTACCAGGGAATGTTCAACGCACCTGCACCAACTTCATGTCTGCTTACCATCTTCAAAACAAAAGACAAGATTGCTATACAGAATGTCACTGGATTTTGCTCCTCTGCTTAAGCATATACCTTTAATGAAATATCTATGGAGGCATTTTGCAGAACAGGTTTTAAATGAGGATCTACGGCTAGTGGTGGGGCAGCAAGAGAGAATGAACAATGGTGCAAACGTATGGAATTTCCCAGTAGCCTACGACAAGCTTGGGGTGAGATACAGAATGTGGAGAGATGCATTGGAGAGAGGAGCCAAACAACTACCATTCTCACCACAACACATAGATTAA 1599 0.4328 MNAIATASALSLPIFLRAGKLDTKRDLKGRFRVFAVFGEEEKKNAWGALFDVEDPRSKFPQNKGKVLDISQALEVARHDIQYLDWRARQDVLTIMHLHEKVVEVLNPLAREYKSIGTLKKELAELQDELAQAHTQVHISEARVTTALDKLAYMEELVNDRLLQDRSTTDVAQTSSSPSTSANSLVTEKRRQPRKSLNVSGPVQSYHPHLKNFWYPVAFSNDLKDDTMIPIECFEEPWVIFRGKDGKPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYTTDGKCEKMPSTRQLNVKIKSVPCFEKEGMIWIWPGNDPPAATLPSILPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVNFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQSTRECSTHLHQLHVCLPSSKQKTRLLYRMSLDFAPLLKHIPLMKYLWRHFAEQVLNEDLRLVVGQQERMNNGANVWNFPVAYDKLGVRYRMWRDALERGAKQLPFSPQHID 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00601 532 Coils Coil 108 142 - -
Gma13g00601 532 SUPERFAMILY ISP domain 208 318 IPR036922 GO:0051537
Gma13g00601 532 SUPERFAMILY Bet v1-like 309 520 - -
Gma13g00601 532 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 213 313 IPR017941 GO:0051537
Gma13g00601 532 Gene3D - 207 329 IPR036922 GO:0051537
Gma13g00601 532 PANTHER CHLOROPHYLLIDE A OXYGENASE, CHLOROPLASTIC-LIKE 69 527 - -
Gma13g00601 532 Gene3D - 336 524 - -
Gma13g00601 532 PANTHER IRON-SULFUR DOMAIN CONTAINING PROTEIN 69 527 - -
Gma13g00601 532 MobiDBLite consensus disorder prediction 165 200 - -
Gma13g00601 532 Pfam Pheophorbide a oxygenase 400 495 IPR013626 GO:0010277
Gma13g00601 532 ProSitePatterns Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 254 276 IPR015881 GO:0005506|GO:0051537
Gma13g00601 532 Pfam Rieske [2Fe-2S] domain 213 296 IPR017941 GO:0051537
Gma13g00601 532 MobiDBLite consensus disorder prediction 165 186 - -
Gma13g00601 532 CDD Rieske_RO_Alpha_Cao 196 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00601 Gma-Chr13 19144451 19150380 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00601 K13600 - gmx:100805998 1092.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00601 13 19144451 19150380 Gma13g00601 13 19144451 19150380 ECH