Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00253 ATGAAGAGCACTAGGAGAGAAATGGAGAAGAAGTCAGAGATAGGTTTAGTCATTGAAGAGCTTTCTATGATAGCCATAGTTAAACCTGGTGAAAATCATGACTCTGCTCACATCCCCACCAAGCTTTTCCTCTCGATTTGTTACTTGGTTCTACAAGTTCTTGATAAGATTGGGCCAACAATGGCTGTCTTGAGACAGGACGTGTACCAGAATATTAAGACATTGGAACTGATGCAGGAATCAAATCCCTCATTGCACTCGAATTTGGTTGAGATATTGAAGTCAGAAGCAACCGAAGGCAATTCTTGGAAAGGGTCAAGCTGCAGTAAGGCCCTTGTTTGGCTCACTAGGACCCTGGATTTCACCTCGCTGTTGTTACAAACACTAGCAAATGATCCTGAAAAGAGAATGGAACAAATAGTTGAAGAGGCTTATGATGTAACTTTAAAACCGTGGCATGGATGGATTTCATCAACTGCTTTCAGAGTGGCTCTAAAACTGGTACCTGAAAGTAAAACATTCGTGAATATTCTTAAAACTGAAGATGAAAACTATGACACCCTAAAGGAGAAAATGCAGATGCTGGTTTCTCTGTTTGTGCCTTTTCTTGAGGATATGCATTGTATTCTGAGATTGTACAACTTGGACAAGCTAAAGTCAACCTGA 666 0.4054 MKSTRREMEKKSEIGLVIEELSMIAIVKPGENHDSAHIPTKLFLSICYLVLQVLDKIGPTMAVLRQDVYQNIKTLELMQESNPSLHSNLVEILKSEATEGNSWKGSSCSKALVWLTRTLDFTSLLLQTLANDPEKRMEQIVEEAYDVTLKPWHGWISSTAFRVALKLVPESKTFVNILKTEDENYDTLKEKMQMLVSLFVPFLEDMHCILRLYNLDKLKST 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00253 221 Gene3D Glycolipid transfer protein 37 211 IPR036497 -
Gma13g00253 221 Pfam Glycolipid transfer protein (GLTP) 38 178 IPR014830 GO:0005737|GO:0120009|GO:0120013
Gma13g00253 221 PANTHER GLYCOLIPID TRANSFER PROTEIN-RELATED 3 218 - -
Gma13g00253 221 PANTHER GLYCOLIPID TRANSFER PROTEIN (GLTP) FAMILY PROTEIN 3 218 - -
Gma13g00253 221 SUPERFAMILY Glycolipid transfer protein, GLTP 33 218 IPR036497 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00253 Gma-Chr13 12865018 12867137 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00253 32 203 Acyl Lipid Metabolism Gene Families AT2G34690 23.121 7.30e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00253 - - gmx:100803131 437.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00253 13 12865018 12867137 Gma13g00253 13 12865018 12867137 ECH