Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00242 ATGGATGTTGCGCATTTCATTTTCGGGATATTTGGGAATGCTTCTGGTTTGTTCCTCTTCTTGGCCCCAATAGTGACATTCTGGAGGATCGTTTCGAACAAATCCACAGAGAAGTTCTCGGGGGTTCCTTACCCTATGACACTTCTCAATTGTCTCCTTTCTGCTTGGTATGGTTTGCCATTTGTGTCCCCAAACAACTTACTTGTGACAATTATCAATGGCACAGGAGCAGGAATTGAAATCATATACGTCTTTATATTCATCTACTTCGCACCAAAGAAAGAGAAGACCAAGATTATTGGCCTTTTCTCCTTCGTGGTGGCAGTGTTCTCTGTTGTTGTTCTGGTGTCACTGTTTGCTCTGCAGGGCAATGCCCGAAAGCTCTTCTGTGGCTTCGCTGCTGCCATATTTTCCATCGTCATGTATGGTTCACCCCTCTCAATTATGAGGCTAGTGATAAAAACCAAGAGCGTGGAGTTCATGCCCTTCTTCCTCTCACTCTTTGTGTTCCTCTGTGGCACATCTTGGTTCATCTACGGGCTACTAGGCCGTGACCCATTTGTGGCTGTACCTAATGGCGTTGGTTCTGCGTTGGGGACAGCACAACTAATATTGTATTTTATCTACCGTGACAACAAAAGTGATCCAAAGAAGATTCCAAGAACAGAAGAAGAAGCTATGGAAATGGGCACCGCTAATAAAAATCCCATATCCAACTCGAATGGAATACAAGagggacgcgtctag 747 0.4351 MDVAHFIFGIFGNASGLFLFLAPIVTFWRIVSNKSTEKFSGVPYPMTLLNCLLSAWYGLPFVSPNNLLVTIINGTGAGIEIIYVFIFIYFAPKKEKTKIIGLFSFVVAVFSVVVLVSLFALQGNARKLFCGFAAAIFSIVMYGSPLSIMRLVIKTKSVEFMPFFLSLFVFLCGTSWFIYGLLGRDPFVAVPNGVGSALGTAQLILYFIYRDNKSDPKKIPRTEEEAMEMGTANKNPISNSNGIQEGRV 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00242 248 MobiDBLite consensus disorder prediction 232 248 - -
Gma13g00242 248 PANTHER RAG1-ACTIVATING PROTEIN 1 4 242 - -
Gma13g00242 248 Pfam Sugar efflux transporter for intercellular exchange 131 213 IPR004316 GO:0016021
Gma13g00242 248 Pfam Sugar efflux transporter for intercellular exchange 7 94 IPR004316 GO:0016021
Gma13g00242 248 Gene3D - 126 219 - -
Gma13g00242 248 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 4 242 IPR018180 GO:0051119
Gma13g00242 248 Gene3D - 9 104 - -
Gma13g00242 248 MobiDBLite consensus disorder prediction 223 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00242 Gma-Chr13 12406843 12409960 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00242 1 190 Miscellaneous Gene Families AT1G21460 77.895 5.97e-108 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00242 K15382 - gmx:100777281 470.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00242 13 12406843 12409960 Gma13g00242 13 12406843 12409960 ECH