Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00227 ATGACAAAAGTTTGTTGGCCATATTTTGATCCGGAGTATGAGAACTTCAGCAACAGAATCAACCCTCCAAGGGTCTCTGTGGACAACGATAGTTGCCATGATTGTACACTGATCAAGTTTGATAGTATTAACAAACCTGGAATTCTGCTGGAAGTGGTGCAAATCCTGACAGACCTTGACTTCATAATTACCAAAGCTTACATATCGTCTGATGGTGGATGGTTTATGGATGTATTTCATGTCACGGATCAGCAAGGAAAGAAGATAACAGACAGCAAAACGATTGACTTCATTGAAAAGACTCTAGGACCAAAAGGCCAGAGCACAGAAGGGGTGAAAAGTTGGAAAGGCAAAAGGGTTGGAGTGCACTCAATTGGTGATCACACAGTAATTGAGCTCATCGGTAGAGACCGCCCTGGTCTTTTGTCTGAGATATCAGCAGTCCTTGCCAGCCTCCAATTCAATGTCATTGCAGCTGAAGTTTGGACTCATAACAGGAGAATAGCTTGTGTCCTTTATGTCAATGATGCTACAAACCAAGCCATGGATGACTCAAAAAGACTGTCTATTATAGAGGAGCAACTCAACCACATCCTACGCGGGTGTGAGGATGATGAGAAAGTGGCTAGGACCAGTTTCTCAATGGGTATCACCCACATGGATCGGAGGCTCCACCAAATGCTGTTTGCTGATAGGGACTATGAAAGTGCTGGAGTAACAACAACAGATGTTGATTGTCCCCCTTGTTTTAGGCCAAATATTAGAATAGAACGTATTGTGGAAAAAGGTTACTCAGTGGTTAGTGTGAAATGCAAAGATCGGGCAAAATTGATGTTTGACATTGTTTGCACTCTCACTGACATGGAATATGTTGTTTTCCATGCTACAATCTCTTCCGAAGGGCAATATGCATCCCAGGAGTACTTTATCCGGCACATGGACGGATGCACACTTGATACTGAAGGAGAGAAAGAAAGGGCCATCAAATGCATTGAAGCTGCCATTCAAAGAAGAGTTAGCGAGGGTGTGAGTCTTGAGCTTTGTGCAAAGGACAGAGTGGGGTTGCTATCTGAAGTGACAAGGATTCTAAGAGAGAATGGCTTAACAGTTAGTAGGGCAGGTGTGTCAACTGTAGGGGAGAAAGGCCTCAATGTGTTCTATGTGAGAGATGCATCTGGGAACCCAGTGGATATGAAGATCATCGAAGCACTACACAAGGAAATTGGACAGACAGTGATGGTCAATGTGAAGAGGATACCAGCTGCCTATGCCAAAGCACCAGTTGAAACCCGAGGTTGGGCTAGAACAAGCTTCTTCTTTGGGAACTTGTTGGAAAGATTCTTGACTTGA 1350 0.4393 MTKVCWPYFDPEYENFSNRINPPRVSVDNDSCHDCTLIKFDSINKPGILLEVVQILTDLDFIITKAYISSDGGWFMDVFHVTDQQGKKITDSKTIDFIEKTLGPKGQSTEGVKSWKGKRVGVHSIGDHTVIELIGRDRPGLLSEISAVLASLQFNVIAAEVWTHNRRIACVLYVNDATNQAMDDSKRLSIIEEQLNHILRGCEDDEKVARTSFSMGITHMDRRLHQMLFADRDYESAGVTTTDVDCPPCFRPNIRIERIVEKGYSVVSVKCKDRAKLMFDIVCTLTDMEYVVFHATISSEGQYASQEYFIRHMDGCTLDTEGEKERAIKCIEAAIQRRVSEGVSLELCAKDRVGLLSEVTRILRENGLTVSRAGVSTVGEKGLNVFYVRDASGNPVDMKIIEALHKEIGQTVMVNVKRIPAAYAKAPVETRGWARTSFFFGNLLERFLT 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00227 449 SUPERFAMILY ACT-like 125 201 IPR045865 -
Gma13g00227 449 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 4 449 IPR040217 -
Gma13g00227 449 CDD ACT_ACR_4 342 413 - -
Gma13g00227 449 PANTHER FOUR ACT DOMAIN ACT DOMAIN PROTEIN WHICH PROTEIN 4 449 - -
Gma13g00227 449 ProSiteProfiles ACT domain profile. 344 421 IPR002912 -
Gma13g00227 449 CDD ACT_ACR_3 264 338 - -
Gma13g00227 449 ProSiteProfiles ACT domain profile. 130 213 IPR002912 -
Gma13g00227 449 Pfam ACT domain 129 167 IPR002912 -
Gma13g00227 449 Pfam ACT domain 37 85 IPR002912 -
Gma13g00227 449 Pfam ACT domain 344 404 IPR002912 -
Gma13g00227 449 Gene3D - 124 200 - -
Gma13g00227 449 Gene3D - 339 419 - -
Gma13g00227 449 CDD ACT_ACR_1 35 106 - -
Gma13g00227 449 SUPERFAMILY ACT-like 32 105 IPR045865 -
Gma13g00227 449 SUPERFAMILY ACT-like 340 410 IPR045865 -
Gma13g00227 449 ProSiteProfiles ACT domain profile. 37 114 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00227 Gma-Chr13 12058103 12063140 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00227 - - gmx:121172621 905.205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00227 13 12058103 12063140 Gma13g00227 13 12058103 12063140 ECH