Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00217 ATGGATTCAGGTTTCTACTTGGTGTCATCACTGAACCACCAAGAAGTAGTCCAAAGCCGTTTCTTCGATCCCTCTTGGCTACAAATGCAACCCCACGTTCCCATGAGCTTTGTTTGGCCCAAAGAGTGCTTAGTGGACGCGAACGAGGAGTTCCACGCTCCAATGGTGGACCTTGGAGGGTTCCTAAGGGGTGATGATGACGAGGCCACAAGCAGAGCCGTTAGGCTCGTGCGCAAGGCGTGCTCGAGCCACGGGTGCTTCCAAGTGATCAACCATGGTGTTGATTCCCGTCTCATCAGGGAAGCATATGATCAAATGGACGCTTTTTTTAAGCTTTCGATTCGTAGAAAAGTGAGTGCTCGAAAGACTCCAGGTTCAGTATGGGGATATTCTGGTGCCCATGCTGATAGGTTCTCCTCCAAATTGCCTTGGAAAGAGACCCTCTCTTTTCCCTTTCATGACAACAATGAGTTAGAGCCGGTTGTTTCTAGGTTCTTTAACAACACCTTAGGGGAAGACTTTGAACAAGCTGGAGTGGTATTCCAGAATTATTGTGAAGCCATGAAGCAGTTGGGGATGAAGCTGTTGGAGCTTTTGGCGATTAGCTTGGGAGTGGATAAGTTGCATTATAAGGACTTGTTTGAAGAAGGTTGTTCCGTCATGAGATGCAACTTTTACCCATCATGTCAGCAGCCAAGTCTTGCATTAGGGACTGGACCACATTGTGACCCAACATCTCTCACCATTCTTCACCAAGACCAAGTTGGAGGGCTTGATGTGTTCGCCGACAACACGTGGCAGACCGTTCCACCTCGTCCCGATGCCCTTGTAGTTAACATTGGTGATACTTTCACGGCATTATCAAATGGGAGATACAAGAGTTGCCTGCACAGGGCAGTGGTTAACAAGTACAAAGAGAGGAGGTCCTTGGCATTCTTTCTGTGCCCCAAAGAGGACAAGGTGGTGAGAGCCCCAGAGGATATTGTGCGTAGGGATGGGACAAAACAGTATCCAGATTTCACATGGTCGAGTTTGCTTGAATTCACACAAAAGTACTACAGAGCCGACGAAGCTACACTGCAGAACTTCACCAAGTGGTTGCTATCCTCCAAACAACAAACCCTTTAG 1128 0.4805 MDSGFYLVSSLNHQEVVQSRFFDPSWLQMQPHVPMSFVWPKECLVDANEEFHAPMVDLGGFLRGDDDEATSRAVRLVRKACSSHGCFQVINHGVDSRLIREAYDQMDAFFKLSIRRKVSARKTPGSVWGYSGAHADRFSSKLPWKETLSFPFHDNNELEPVVSRFFNNTLGEDFEQAGVVFQNYCEAMKQLGMKLLELLAISLGVDKLHYKDLFEEGCSVMRCNFYPSCQQPSLALGTGPHCDPTSLTILHQDQVGGLDVFADNTWQTVPPRPDALVVNIGDTFTALSNGRYKSCLHRAVVNKYKERRSLAFFLCPKEDKVVRAPEDIVRRDGTKQYPDFTWSSLLEFTQKYYRADEATLQNFTKWLLSSKQQTL 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00217 375 PANTHER GIBBERELLIN 20-OXIDASE 13 370 - -
Gma13g00217 375 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 217 316 IPR005123 -
Gma13g00217 375 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 13 370 - -
Gma13g00217 375 SUPERFAMILY Clavaminate synthase-like 29 355 - -
Gma13g00217 375 Pfam non-haem dioxygenase in morphine synthesis N-terminal 54 154 IPR026992 -
Gma13g00217 375 PRINTS Isopenicillin N synthase signature 77 94 - -
Gma13g00217 375 PRINTS Isopenicillin N synthase signature 241 262 - -
Gma13g00217 375 PRINTS Isopenicillin N synthase signature 276 302 - -
Gma13g00217 375 Gene3D - 26 348 IPR027443 -
Gma13g00217 375 Pfam 2OG-Fe(II) oxygenase superfamily 219 316 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00217 Gma-Chr13 11572985 11576308 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00217 33 354 Glycosyltransferase AT5G59530 28.529 2.22e-31 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00217 K05282 - gmx:100801187 778.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00217 13 11572985 11576308 Gma13g00217 13 11572985 11576308 ECH