Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00173 ATGAAAGGAATAATAGCATTGCACACGCTTTTGCCATTTCTTCTATTTTCTGCCATTTTACCACTCTCTTTCTCAGCTCAACCCCGCAACGCCAAGAAGCCCAAAACCCCATATTCTGATAATAATCATCATCGCCTTTCCTCCTCTGCTGTTTTCAAACTTCAGGGAAATGTGTACCCTCTTGGGCATTACACAGTGTCTCTCAACATTGGCTATCCCCCCAAGCTTTATGACCTTGACATTGACTCGGGTAGTGACCTTACTTGGGTTCAGTGTGATGCACCATGTAAAGGTTGCACCAAGCCTCGCGATCAACTTTATAAACCCAATCACAACCTTGTGCAATGTGTGGACCAGTTGTGTTCTGAAGTGCACTTATCAATGGCCTATAATTGTCCTTCCCCAGATGACCCATGTGACTATGAGGTTGAGTATGCAGATCATGGATCATCTCTGGGTGTGCTAGTCCGGGATTACATTCCTTTTCAATTCACCAATGGCTCTGTGGTGCGCCCTAGGGTAGCCTTTGGGTGCGGATATGATCAAAAGTATTCTGGTTCTAACTCCCCACCTGCTACGTCAGGAGTCCTTGGCCTTGGGAATGGCAGAGCAAGCATTTTGTCTCAGCTTCATTCTTTGGGTCTGATCCGCAATGTTGTTGGCCACTGCCTAAGTGCACAAGGAGGAGGGTTTTTATTCTTCGGAGATGATTTCATTCCCTCTTCAGGAATTGTTTGGACATCCATGTTGTCGAGTTCTTCGGAAAAACACTACAGCTCAGGACCAGCAGAACTGGTTTTCAATGGAAAGGCTACTGCTGTTAAGGGTCTTGAACTTATCTTCGATAGTGGGAGCTCTTACACATACTTCAACTCACAAGCCTATCAAGCTGTTGTTGATTTAGTAACTAAAGATTTAAAGGGAAAACAGTTGAAAAGAGCAACTGATGACCCATCACTTCCAATTTGTTGGAAGGGTGCAAAGTCTTTCGAATCGTTAAGTGATGTCAAGAAATATTTCAAGCCCCTAGCATTGAGCTTCAAAAAAATCATGAATTTGCAGATGCACCTACCACCAGAATCTTACCTTATTATCACTAAACATGGCAATGTCTGCTTGGGGATTCTAGATGGCACTGAAGTAGGACTAGAAAATCTGAACATAATAGGAGACATCACTTTACAAGATAAAATGGTGATTTATGACAACGAGAAACAGCAGATTGGATGGGTTTCTTCAAATTGTGATAGGCTTCCCAATGTGGATCGTGATTTGGAAGGTGATTTTCCACACCCATATGCAACAAATTTGGGTATCTTTGGGGACCGTTGCCCTGCATCATATGAAGAAACAGGCTGTGAATGA 1365 0.433 MKGIIALHTLLPFLLFSAILPLSFSAQPRNAKKPKTPYSDNNHHRLSSSAVFKLQGNVYPLGHYTVSLNIGYPPKLYDLDIDSGSDLTWVQCDAPCKGCTKPRDQLYKPNHNLVQCVDQLCSEVHLSMAYNCPSPDDPCDYEVEYADHGSSLGVLVRDYIPFQFTNGSVVRPRVAFGCGYDQKYSGSNSPPATSGVLGLGNGRASILSQLHSLGLIRNVVGHCLSAQGGGFLFFGDDFIPSSGIVWTSMLSSSSEKHYSSGPAELVFNGKATAVKGLELIFDSGSSYTYFNSQAYQAVVDLVTKDLKGKQLKRATDDPSLPICWKGAKSFESLSDVKKYFKPLALSFKKIMNLQMHLPPESYLIITKHGNVCLGILDGTEVGLENLNIIGDITLQDKMVIYDNEKQQIGWVSSNCDRLPNVDRDLEGDFPHPYATNLGIFGDRCPASYEETGCE 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00173 454 Pfam Xylanase inhibitor C-terminal 278 410 IPR032799 -
Gma13g00173 454 Gene3D Acid Proteases 38 236 IPR021109 -
Gma13g00173 454 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 2 418 - -
Gma13g00173 454 CDD nucellin_like 62 415 IPR033823 GO:0004190
Gma13g00173 454 Gene3D Acid Proteases 240 419 IPR021109 -
Gma13g00173 454 ProSiteProfiles Peptidase family A1 domain profile. 64 411 IPR033121 -
Gma13g00173 454 SUPERFAMILY Acid proteases 56 420 IPR021109 -
Gma13g00173 454 PANTHER ASPARTYL PROTEASES 2 418 IPR001461 GO:0004190|GO:0006508
Gma13g00173 454 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 279 290 IPR001969 GO:0004190|GO:0006508
Gma13g00173 454 PRINTS Pepsin (A1) aspartic protease family signature 70 90 IPR001461 GO:0004190|GO:0006508
Gma13g00173 454 PRINTS Pepsin (A1) aspartic protease family signature 279 290 IPR001461 GO:0004190|GO:0006508
Gma13g00173 454 PRINTS Pepsin (A1) aspartic protease family signature 387 402 IPR001461 GO:0004190|GO:0006508
Gma13g00173 454 Pfam Xylanase inhibitor N-terminal 64 236 IPR032861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00173 Gma-Chr13 10502953 10506849 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00173 27 419 Miscellaneous Gene Families AT1G77480 58.376 8.40e-170 482
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00173 - - gmx:100796332 936.021
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00173 13 10502953 10506849 Gma13g00173 13 10502953 10506849 ECH