Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g02190 atgcagttatcaattgcatGCAGTCATCATGTACATGGACTTGCCCCAGTGCATTCACACACCAACCTTGCCCAAACAACCATTCCACTCAAACGTGCCTTCTCTGTTTTGACTCAAACCAAATCAAATTCTAGGATCACACTCACATGCAATTCCCAACCTCAACCACTGCTAAACCTTTGCACACCAAAACCACCAACAAGAATCTTCAGTTCCAACGTTCGGTGTGGCATTTCTTCCAACATGTATGGTGGAAACGAGGTTAGGAGTGTCCGAGAGTGGCTTGTGCTGGCTGGTGAGTTTCTCTCAATGGCATTTCCATTGTGGGTCTCAATTGGGTGCGTATTGGGGTTGATGAAACCAAATTGCTTCAATTGGGTCACTCCAAAAGTGACAATTAGGGGCCTCAACATCATCATGCTTGGAATGGGTATGACCTTAACTCTTGATGATCTTCGTGGGGCTCTTGCCATGCCTAAGCAAGTTCTCTATGGTTTTGTACTTCAGTATTCGGTGATGCCACTGTCTGGATTTCTCATAAGCACACTCTTAAATCTTGCACCACATTTTGCAGCAGGTTTAATATTAATTGGGTGCAGTCCAGGAGGTATGAATTTTAATTTTGTGGTTCTTAGTTTTCTTATAATTCTATCCATCATATTCAAAATGGTCGATCTTTGTTTGATCATGACTCCTTTTCTGACAGCAACACTTGCTGGTAAATATGTAGCAGTGGACGCGTCTGGCTTATTGATTTCAACACTGCAAGTTGTGCTTTTTCCTGTGTTGGCTGGTGCATTTCTGAACCAGTTTTTCAAACCTTTTGTTAAACTTGTCTCTCCATTGATGCCACCCATTGCAGTAACAACTGTGGCAATTTTGTGTGGAAACTCTATTGCCCAGAGTTCTTCAGCAATCCTTGTGTGTGGTGGACAAGTGATTTTAGCTACCTTTCTTCTCCATGCTTCTGGGTTTTTCTTTGGTTACATATTTGGAAGATTGCTTGGGTTAGATGTGTCATCATCGCGAACCATATCCACTCAGGTTGGCATGAAGAACTCAGTTCTCGGGATTGTTCTGGCTACAAAGCACTTTGGAGATCCCCTAACTGCCGTACCTGGTGCTGTTTCAATTGTGTTTCAGTCAATTATTGGTAGTATCCTTGCAGGAATATGGAGAGATTCTATGCCTGCCAAATCTCATGCTTTCGTTTTCTTTCCTTTCTCTATCGCGCCATTCTCTCTTTTCTCTCTCAGCATCCCTACCGAGATCAACAGTTGTTGGCTTTGCTGCGTGATCGACACCGACACCAATAGGTTCCGCGACGTCAACAAATCTCGAACGAGTGGAAGACGGACAAGAAGCAGTGAAAGGGTCCTCCTTGGTCAGTGGCTTGGTTTGAGCCCTAACCCTAACCTCATACGTGGGCCAGGGGAAAAAAAGGTTTGCAATAGTACTTACTAA 1464 0.4337 MQLSIACSHHVHGLAPVHSHTNLAQTTIPLKRAFSVLTQTKSNSRITLTCNSQPQPLLNLCTPKPPTRIFSSNVRCGISSNMYGGNEVRSVREWLVLAGEFLSMAFPLWVSIGCVLGLMKPNCFNWVTPKVTIRGLNIIMLGMGMTLTLDDLRGALAMPKQVLYGFVLQYSVMPLSGFLISTLLNLAPHFAAGLILIGCSPGGMNFNFVVLSFLIILSIIFKMVDLCLIMTPFLTATLAGKYVAVDASGLLISTLQVVLFPVLAGAFLNQFFKPFVKLVSPLMPPIAVTTVAILCGNSIAQSSSAILVCGGQVILATFLLHASGFFFGYIFGRLLGLDVSSSRTISTQVGMKNSVLGIVLATKHFGDPLTAVPGAVSIVFQSIIGSILAGIWRDSMPAKSHAFVFFPFSIAPFSLFSLSIPTEINSCWLCCVIDTDTNRFRDVNKSRTSGRRTRSSERVLLGQWLGLSPNPNLIRGPGEKKVCNSTY 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g02190 487 Pfam Sodium Bile acid symporter family 135 297 IPR002657 GO:0016020
Gma12g02190 487 PANTHER SODIUM-BILE ACID COTRANSPORTER 41 400 IPR004710 -
Gma12g02190 487 PANTHER SODIUM/METABOLITE COTRANSPORTER BASS1, CHLOROPLASTIC-RELATED 41 400 - -
Gma12g02190 487 Gene3D - 91 395 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g02190 Gma-Chr12 42946937 42953057 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g02190 75 399 Organic Solute Cotransporters AT1G78560 64.742 1.50e-144 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g02190 K03453 - gmx:100788639 729.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g02190 12 42946937 42953057 Gma12g02190 12 42946937 42953057 ECH