Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g02189 atgtctctctttgctgcattttccatttgtaaagttgccaaggatgcagctggagttgcagGAAATGTGTTTGCTTTTGGGTTGTTTGTGTCTCCCATACCCACATTTAGGAGGATTATCAGAAATGGGTCAACAGAGATGTTCTCAGGGTTGCCATATATTTATTCCCTTCTGAACTGCTTGATCTGCATGTGGTATGGCACACCTCTGATATCTGCTGATAATTTGTTGGTTACAACTGTTAATTCAATTGGAGCAGTCTTTCAGTTTGTGTACACAATCATCTTCCTGATGTATGCTGAGAAAGCAAAGAAGGTGAGAATGGTTGGATTATTGCTGGCAGTTCTTGGCATGTTTGCAATCGTATTGGTTGGGAGCTTGCAGATAGATGACGTTATAATGCGTCGGTTCTTTGTGGGGTTCTTGAGCTGCGCGTCTCTCATTTCAATGTTTGCCTCTCCATTGTTTATAATTAAATTGGTCATTCAGACAAAGAGTGTTGAATTCATGCCGTTTTATCTCTCACTTTCCACCTTCCTAATGAGCACCTCTTTCTTACTTTATGGATTATTCAACGATGATGCTTTTATTTATGTGCCAAATGGGATAGGAACTATTTTGGGAATGATACAGTTGATATTATACTTCTACTTCGAGAGTAAATCTAGAGAGAGCTCCAGAGAACCTCTGATAGTATCATATGCATGA 708 0.3588 MSLFAAFSICKVAKDAAGVAGNVFAFGLFVSPIPTFRRIIRNGSTEMFSGLPYIYSLLNCLICMWYGTPLISADNLLVTTVNSIGAVFQFVYTIIFLMYAEKAKKVRMVGLLLAVLGMFAIVLVGSLQIDDVIMRRFFVGFLSCASLISMFASPLFIIKLVIQTKSVEFMPFYLSLSTFLMSTSFLLYGLFNDDAFIYVPNGIGTILGMIQLILYFYFESKSRESSREPLIVSYA 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g02189 235 PANTHER RAG1-ACTIVATING PROTEIN 1 9 235 - -
Gma12g02189 235 Gene3D - 137 230 - -
Gma12g02189 235 Pfam Sugar efflux transporter for intercellular exchange 138 222 IPR004316 GO:0016021
Gma12g02189 235 Pfam Sugar efflux transporter for intercellular exchange 18 103 IPR004316 GO:0016021
Gma12g02189 235 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET2 9 235 - -
Gma12g02189 235 Gene3D - 11 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g02189 Gma-Chr12 42940352 42943844 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g02189 1 234 Miscellaneous Gene Families AT3G14770 65.957 2.63e-112 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g02189 K15382 - gmx:100776187 447.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g02189 12 42940352 42943844 Gma12g02189 12 42940352 42943844 ECH