Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g02180 ATGGTGTTCACAATGTGGTTGAGGCCTCTGATACTAGCCTCTGTTTTTGTATGGGCAGTGGCAACTCCTTCTCCACAAGGATGTGATTTTTCTCATGGCAGATGGATCATTGATGAAGCTTCCTTACACCCTCTCTATGATGCCTCAAGGGACTGTCCCTTCATTGGGTTTGATTGCTCAAGATATGCAAGGCCTGATAAGGATTATCTCAAGTATAGATGGATGCCCTCTGGTTGTGATCTTCCAAGGTTTGATGGTAAGAAGTTCTTGGAGAGAAGCATAGGAAAGAAGATAATGTTTGTGGGGGACTCCATAAGTAACAACATGTGGCAGTCACTCACTTGTTTGCTACACATTGCAGTCCCAAACTCAAATTACACTTTAACAAGTCAAACACAGGAACTTTTGGTGTTCTCAGTTCCGGAATATAAAGCTTCAATCATGTGGTTGAAAAATGGGTTCCTAGTTGATTTGGTTCATGACAAAGAAAGAGGTAGAATTTTGAAATTGGATAGCATTAGTTCTGGGGACCAGTGGAAAGAAGTGGATGTTTTGATTTTCAACACCTACCATTGGTGGACTCACACTGGACAGTCTCAAGGGTGGGATTACTTTCAAGTGGGCAATGAATTAAGAAAGGAAATGGATCACATGGAAGCTTTCAAGATTGGGCTGAGTACTTGGGCTAAATGGGTTGATTCTAACATTGATCCTTCAAAGACTAGAGTCTTGTTTCAGGGAATCGCTGCTTCCCATGTTGATAAAAAGGGGTGCCTAAGGCAAACTCAACCAGATGAAGGACCAATGCCACCATATCCTGGTGCAGACATTGTGAAGAGCGTTATAAGTAACATGGCAAAGCCTGCAGAATTGCTAGACATCACTCTGCTCACACAACTGAGGAGGGATGGTCACCCCTCTATCTACACAGGGCGTGGCACTTCTTTTGATGACTGCAGTCACTGGTGTCTGGCTGGTGTTCCTGATGCTTGGAATGAAATATTGTATGCTGTTCTCTTTGGAAATTATTAG 1032 0.4302 MVFTMWLRPLILASVFVWAVATPSPQGCDFSHGRWIIDEASLHPLYDASRDCPFIGFDCSRYARPDKDYLKYRWMPSGCDLPRFDGKKFLERSIGKKIMFVGDSISNNMWQSLTCLLHIAVPNSNYTLTSQTQELLVFSVPEYKASIMWLKNGFLVDLVHDKERGRILKLDSISSGDQWKEVDVLIFNTYHWWTHTGQSQGWDYFQVGNELRKEMDHMEAFKIGLSTWAKWVDSNIDPSKTRVLFQGIAASHVDKKGCLRQTQPDEGPMPPYPGADIVKSVISNMAKPAELLDITLLTQLRRDGHPSIYTGRGTSFDDCSHWCLAGVPDAWNEILYAVLFGNY 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g02180 343 Pfam PMR5 N terminal Domain 27 80 IPR025846 -
Gma12g02180 343 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 10 342 - -
Gma12g02180 343 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 81 337 IPR026057 GO:0016740
Gma12g02180 343 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 10 342 IPR029962 GO:0016413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g02180 Gma-Chr12 42811290 42813620 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g02180 - - gmx:100818058 729.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g02180 12 42811290 42813620 Gma12g02180 12 42811290 42813620 ECH