Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g02179 ATGTATATAAATGCCACAAGCTTAGTGGATAGAACAACACAAATACTCATAACTCATCAGAGAGAAAAGAACCCTCTCCATACCCCTTTCTTCTGCATTACCATATTCTTTGTCTCTCCTCGTACCCAAGAGAGAGAGATTAAGAAAATGGGTGAGGGTGTTGTCTCTTGTCGTCTGCAGCTGTTCTTCTTCCTTCTTCATGGGTTGTTGTTGTCGAAAGTGAGAGGAAAGGGTTCTTCTTCGGCTTTGGATTATGCGCAGTGCGATGTGTTCACGGGAACGTGGGTGGTGGACGAATCGTACCCGCCCTATGATCCCGCCACGTGTCCCTTCATCGAGCGCGAGTTCAGGTGCAAAGGGAATGGACGGCCCGATCTCCTTTACACCCGCTATAGGTGGCACCCACTTGCCTGTAATTTACTCAGATTTAACGGGCTAGATTTTCTGGAGAAGATGAGGGGGAAGAGCATCATGTTCGTGGGAGATTCACTGAGCAGGAATCAATGGCAGTCCTTGACTTGCTTGCTTCATTCAGCAGTGCCCAATTCACCTTATACTTTGGATAGAGTTGGAGATGTTTCTATTTTCACACTTACGGAGTATAGGGTTAAAGTGATGCTTGATAGGAACGTGTATCTAGTTGACGTTGTCAGAGAGGATATAGGCAGGGTCTTGAAGCTTGATTCAATACAAGGAAGCAAGCTGTGGCAAGGGATTGATATGCTCATCTTTAACACATGGCACTGGTGGTACCGTAGAGGACCCACTCAACCATGGGATTTTGTCGAATTGGGAGGTCATACTTATAAAGACATTGATCGGATGAGGGCTTTTGAAATAGCACTTAAGACGTGGGGTGCATGGGTAGACGCCAACGTCGACCCTACGAGAGTGAAAGTCTTCTTTCAAGGAATTTCCCCATCTCACTACAATGGCAGCCTATGGAACGAACCAAGTGCAACGAGCTGCATCCGGCAGAAGACACCGGTGCCGGGATCAACCTATCCCGGAGGGTTGCCACCGGCCGTGGCGGTGTTAAAGAGTGTGCTGAGCACAATCAGGAAGCCAGTCACTCTGCTTGACATCACAACCCTCTCACTGCTCAGAAAAGATGGCCACCCTTCCATTTATGGTCTCAATGGAGCCGCCGGAATGGACTGCAGCCATTGGTGTCTTCCTGGTGTTCCAGATACTTGGAACGAGATACTTTACAACCTTATTTGA 1224 0.4796 MYINATSLVDRTTQILITHQREKNPLHTPFFCITIFFVSPRTQEREIKKMGEGVVSCRLQLFFFLLHGLLLSKVRGKGSSSALDYAQCDVFTGTWVVDESYPPYDPATCPFIEREFRCKGNGRPDLLYTRYRWHPLACNLLRFNGLDFLEKMRGKSIMFVGDSLSRNQWQSLTCLLHSAVPNSPYTLDRVGDVSIFTLTEYRVKVMLDRNVYLVDVVREDIGRVLKLDSIQGSKLWQGIDMLIFNTWHWWYRRGPTQPWDFVELGGHTYKDIDRMRAFEIALKTWGAWVDANVDPTRVKVFFQGISPSHYNGSLWNEPSATSCIRQKTPVPGSTYPGGLPPAVAVLKSVLSTIRKPVTLLDITTLSLLRKDGHPSIYGLNGAAGMDCSHWCLPGVPDTWNEILYNLI 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g02179 407 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 142 405 IPR026057 GO:0016740
Gma12g02179 407 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 41 70 407 - -
Gma12g02179 407 Pfam PMR5 N terminal Domain 87 139 IPR025846 -
Gma12g02179 407 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 70 407 IPR029962 GO:0016413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g02179 Gma-Chr12 42800465 42806439 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g02179 - - gmx:100817531 844.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g02179 12 42800465 42806439 Gma12g02179 12 42800465 42806439 ECH