LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma12g02170	ATGGCGCAGACCCAAACCCTATCCTTCATTCACGAGATCGAATCTCTCGTCTCCGATAAACTTCAAGTGGTTTCGTACAAATGGCTGAGTCGCAATTATATGGTATCGTCCGATGAAGCAAAGAGGTTGCTTCAGGAGTTTGTGCAAAAACATGAGGGTGGGTTGGAGGTGGTGTATGCTTTGTCTGGCTGGTTAAAGAGCAACCATCCTAGTTACCACGTAAGGCTTGTTACCGGGCCAAAGCTTGCAGAAGCACAACAAGAATTTGATGGTGATTGCTCCGTTCAGATATATAGTGTGCAAGCTAGCATTCCCAAGGATCCAGCTGTTCTTTGGAATGCTGAGTTCATTCAAGCAGAGGAGCTCTTCAAGCAACCTTCCTCGGTTGACAATTGTTTGAGGGATAATAGGTTCTGTGGGATCTCTAATTCTTTTGTGCAGCGGAATGTGGATGGCCCAACAGTAGTTTTTGCAGCTCCTCAATCAAAATCTGTAGGTGAGGGACCAACAAAGAGTGACATAGTTCAGCAACCTCCTAAAAATATATCACGTGATTCGATTGACAAAGTCGATACCAAACCACAGAGTGTGGTAAAAGAAGTCAAGAGTGAAAGCAATGGTATAGGGAATACTGGAGTTCATGATAACATGAACAAACCTACTGCAGATAAAGAAAAGGCCCCTCCCTTACCCACAGGCAAAAAGAAAGTACAAGCTGATAAAAGTGGTTCTGTTAATGGAGGTTCATTAGCAAGCCTTTGGGGCCGTGCATCTGCAAAACCCAAGCCTTGCTCCTCATCAGCAGAAAATAATAACAAAATTTCAAATCCTCTTGTATCTACTGAAGCTGGACAAACTGCTGCTTGTGAAGCAGAAGAGTGTGACAGTGGTAATGATGATAATCAAGATGTCTCCTTGAGGAGGTCGTCCAATAGGAAAAGAAGGGTTGTCTTTGATTTCTCAGATGAAGATGAAGATGATGTTGTCAGTTTAGCATCACCTGATCTCCCAAATAAACAATCATCTCTAGATTCTAGACAAAATGACAAAAAAACATCAGAGAAAACCACTCTGAATTTTGATTTGCAGGAAGAAAATAAATCAGGGGTTAAGGAAGAAAGAGCAACTGAGCAAAAAGCTCACCTTCCACTGAGAGAAAATGTATCAGCTATCAGCAGGTGCACAAATACTGGGAAATCATCTTCTGAGAAGTTGCAGAGTGGTGCTCCTGAAGTACATTTAAATAAGGATAGTGTAAACAATGCCCCTCCATGTTCACCTAAGAGGAGAAAAGTGATGAAGACCAGGATTGATGAACGAGGGAGAGAAGTAACTGAAGTAGTCTGGGATGGGGAGGAGACAGAAGAGAAGAAACCTGATAAGGTTACAACAAAGAAGTCTGACAGTAACGCATCTACCAAAGCTATCAATAGTGCTCCAGCAACTAAGAAGCCACCAGCCAATTCAAATGCCATTAGTGGAAAAGGAGGAAAGAAAGCAGGAAACTCAAAGGATCCCAAACAGGGCAATATTCTTTCATTTTTCAAGAGAGTTTGA	1557	0.4226	MAQTQTLSFIHEIESLVSDKLQVVSYKWLSRNYMVSSDEAKRLLQEFVQKHEGGLEVVYALSGWLKSNHPSYHVRLVTGPKLAEAQQEFDGDCSVQIYSVQASIPKDPAVLWNAEFIQAEELFKQPSSVDNCLRDNRFCGISNSFVQRNVDGPTVVFAAPQSKSVGEGPTKSDIVQQPPKNISRDSIDKVDTKPQSVVKEVKSESNGIGNTGVHDNMNKPTADKEKAPPLPTGKKKVQADKSGSVNGGSLASLWGRASAKPKPCSSSAENNNKISNPLVSTEAGQTAACEAEECDSGNDDNQDVSLRRSSNRKRRVVFDFSDEDEDDVVSLASPDLPNKQSSLDSRQNDKKTSEKTTLNFDLQEENKSGVKEERATEQKAHLPLRENVSAISRCTNTGKSSSEKLQSGAPEVHLNKDSVNNAPPCSPKRRKVMKTRIDERGREVTEVVWDGEETEEKKPDKVTTKKSDSNASTKAINSAPATKKPPANSNAISGKGGKKAGNSKDPKQGNILSFFKRV	518

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma12g02170	518	MobiDBLite	consensus disorder prediction	160	380	-	-
	Gma12g02170	518	PANTHER	DNA POLYMERASE DELTA SUBUNIT 3	1	517	IPR019038	GO:0005634\|GO:0006260\|GO:0043625
	Gma12g02170	518	Gene3D	DNA polymerase delta, p66 (Cdc27) subunit, wHTH domain	6	147	IPR041913	-
	Gma12g02170	518	MobiDBLite	consensus disorder prediction	393	431	-	-
	Gma12g02170	518	MobiDBLite	consensus disorder prediction	344	380	-	-
	Gma12g02170	518	MobiDBLite	consensus disorder prediction	184	198	-	-
	Gma12g02170	518	MobiDBLite	consensus disorder prediction	165	183	-	-
	Gma12g02170	518	MobiDBLite	consensus disorder prediction	448	518	-	-
	Gma12g02170	518	MobiDBLite	consensus disorder prediction	468	489	-	-
	Gma12g02170	518	Pfam	DNA polymerase subunit Cdc27	23	517	IPR019038	GO:0005634\|GO:0006260\|GO:0043625
	Gma12g02170	518	MobiDBLite	consensus disorder prediction	199	217	-	-
	Gma12g02170	518	MobiDBLite	consensus disorder prediction	393	408	-	-
	Gma12g02170	518	MobiDBLite	consensus disorder prediction	263	283	-	-
	Gma12g02170	518	MobiDBLite	consensus disorder prediction	448	467	-	-
	Gma12g02170	518	MobiDBLite	consensus disorder prediction	300	321	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma12g02170	Gma-Chr12	42578340	42584798	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma12g02170	K03504		-	gmx:100812372	999.193

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma12g02170	12	42578340	42584798	Gma12g02170	12	42578340	42584798	ECH