Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g02169 ATGGGTTGTGCTGGATCTTCACAATCCAAGCCTGATGGGGCAGTAAAAAAGATCCGGAAACCTAAGCCTTGGAAGCATCCTCAGCCCATAACAAAGACTCAGCTTACACAATTACGTGATGAGTTTTGGGATACAGCTCCTCACTATGGTGGCCGGAAAGAGATTTGGGATGCTCTTCGAGCTGCTGCTGAGGCTGATCTAACTTTAGCACAAGTAATTGTGGATAGTGCTGGGGTCATTGTCCAGAGTTCTGATTTGACAGTATGCTATGATGAAAGAGGAGCAAAGTATGAGCTACCCAAGTACGTTTTGAGCGAGCCAACTAACCTGATTCGGGACAGTTAA 345 0.4609 MGCAGSSQSKPDGAVKKIRKPKPWKHPQPITKTQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQVIVDSAGVIVQSSDLTVCYDERGAKYELPKYVLSEPTNLIRDS 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g02169 114 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 1 111 - -
Gma12g02169 114 Pfam Ubiquitin-binding domain 16 113 IPR032752 -
Gma12g02169 114 MobiDBLite consensus disorder prediction 1 31 - -
Gma12g02169 114 Gene3D - 31 104 IPR038169 -
Gma12g02169 114 PANTHER UBIQUITIN DOMAIN CONTAINING 1 PROTEIN-RELATED 1 111 IPR039869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g02169 Gma-Chr12 42571817 42576353 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g02169 - - gmx:100812911 236.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g02169 12 42571817 42576353 Gma13g02378 13 38546301 38551602 ECH
Gma12g02169 12 42571817 42576353 Gma12g02169 12 42571817 42576353 ECH