Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g02166 ATGGAATCAGTGAAGCCGTCGGCCGTGACCCCGCGAAAGAAGTTGGCACGCAATTTTGCGAAGGTTCTTCATGTCAAAGCACTGATTGGAATTGCTTCAGTTGATGGATTGAAGAATGTTATATCTGATGCAAATCTCAAGGATGAAGGGAACATTGGTAAGAGTAAGGCTACACTGAATTGGTCTGAGTCATTCAATGAAGATGATGATGAAGACCTTCAAGAGAGAGAGGCCAATGAAGCACTTTTGGCAAAGCTTTTTGCTAGCATTTCAACTGTTAAAGCTGCATATGCTGAGTTGCAGTATGCTCAGTCACCTTTTGACCCTGATGGCATTGAAGCTGCTGATCAATTGCTAGTGTCTGAGTTGAAGAACTTATCTGAGCTAAAGCAATGTTACTTGAAGAAACAGTTTGATCCTTCACCCAAGACTGCAATACTCGAGGCCGAATCCAAGGAATTGCAGGGTGTGATCAAAACCTACGAGATCATGGGGAAGAAGTTGGAGTCACAGGTGAGGCTCAAGGATTCCGAGATAATTTTTCTTAGGGAGAAGTTGGAGGAAGCTAATAGGCAGAACAAGGCAATCGAGAAGAGATTGAATCAAAGTGGCCAACTATCCGGGCTTGATAATCTTCACATAACAGGATTAAGTCCTAGCCATTTCATCACGGTTCTTCGCCACACGGTCCGGTCCATTCGCAACTTTGTGAGGCTGATTGTTGATGAGATGAGATATGCAGGTTGGGACGTTGATGCCACGGTCGACGCCATCGAGCAGAATGTGGTTTATATGGCGGAAGATCACAAGTGTTTCGCGATCGAGGCCTTTGTTTGCAGGGAAATGTTTGATGCATTCCACATTCCAAACTTCGCCCTTTCAAGCGAGTCTCTTCTAGACAAAAACAGGAGACAACAGTGGTTCTTTGGGAAGTTCAATGAGATGAAATCAATGAAGGCAAAGTACTACCTAGCCGAGAAGCCAAGATCATCGTTCGCAAAGTTTTGCCGGGTCAAGTATTCGAGACTTGTCCATCCCAAGATGGAGTCATCGTTTTTTGGCAACCAGAGTCATAGGAACCTTGTGAATGCAGGAGGGTTTCCAGACACTGAATTCTTTGCCTCATTCGCCGAGATGGCGAAGAGGGTGTGGCTTCTACACTGCTTGGCCTTCTCCTATGAGCCTCAGGCTTCAATCTTCCAAGTGGGGAAAGGGTGCAGATTCTCTGATGTGTACATGGAAAGTGTGAATGATGAAGTCTTCCTCTATTCAGAAGTGGAATCAGATCCACAAGTTGCTTTCACAGTAGTTCCAGGGTTTAGGATTGGTAAAACTGTTTTACAGTGTCAAGTGTACCTCTCACAGCACCAAACCAAGGTTAAAAAAAAAATAACTTCAACAAAGCAAAGGTAG 1413 0.4459 MESVKPSAVTPRKKLARNFAKVLHVKALIGIASVDGLKNVISDANLKDEGNIGKSKATLNWSESFNEDDDEDLQEREANEALLAKLFASISTVKAAYAELQYAQSPFDPDGIEAADQLLVSELKNLSELKQCYLKKQFDPSPKTAILEAESKELQGVIKTYEIMGKKLESQVRLKDSEIIFLREKLEEANRQNKAIEKRLNQSGQLSGLDNLHITGLSPSHFITVLRHTVRSIRNFVRLIVDEMRYAGWDVDATVDAIEQNVVYMAEDHKCFAIEAFVCREMFDAFHIPNFALSSESLLDKNRRQQWFFGKFNEMKSMKAKYYLAEKPRSSFAKFCRVKYSRLVHPKMESSFFGNQSHRNLVNAGGFPDTEFFASFAEMAKRVWLLHCLAFSYEPQASIFQVGKGCRFSDVYMESVNDEVFLYSEVESDPQVAFTVVPGFRIGKTVLQCQVYLSQHQTKVKKKITSTKQR 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g02166 470 Coils Coil 172 206 - -
Gma12g02166 470 Pfam Plant protein of unknown function (DUF641) 75 199 IPR006943 -
Gma12g02166 470 PANTHER PROTEIN GRAVITROPIC IN THE LIGHT 1 38 461 IPR040225 GO:0009639|GO:0009959
Gma12g02166 470 PANTHER UNE1-LIKE PROTEIN 38 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g02166 Gma-Chr12 42534223 42539332 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g02166 - - gmx:100810236 930.243
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g02166 12 42534223 42539332 Gma13g02381 13 38585383 38590816 ECH
Gma12g02166 12 42534223 42539332 Gma12g02166 12 42534223 42539332 ECH