Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g02162 ATGGCGAAGGGAGCAACTTCAAAACTTAACATCGCAATAATTCACCCAGATCTTGGCATAGGTGGAGCTGAGAGATTGATTGTAGATGCTGCCGTTGAGCTTGCGTCCCAAGGCCATAAAGTTCATGTTTTTACTGCACATCATGATAAAAACAGATGCTTTGAGGAAACTGTTGCTGGCACCTTTCCAGTTACTGTGCATGGTTCCTTTCTTCCCCGGCATATATTCTACCGTCTTCATGCATTGTGTGCATACCTTCGGTGCCTATTTGTTGCTTTCTGTGTACTTTTCATGTGGCATTCATTTGATGTTATCCTGGCAGATCAAGTCTCTGTGGTTATTCCCATCTTGAAACTCAAAAGATCAACAAAGGTTGTATTCTACTGCCATTTTCCAGACTTGTTGCTGGCTCAACATTCAACTTTCATTAGGAGAATGTATCGAAAACCAATAGACCTTGCAGAAGAAATAACAACTGGAATGGCTGATTTGATACTTGTTAACAGCAAGTTCACTGCATCTACTTTTGCAAATACTTTTAAGTATCTAGATGCTAAAGGAATTCGACCAGCTGTTTTATATCCAGCGGTTAATGTGGATCAGTTCAATGAACCCAGTTCCTTTAAGCTGAATTTTCTTTCCATCAATCGCTTTGAAAGGAAGAAGAATATACAATTAGCTATTTCAGCTTTTGCTATGCTTAACTCACCCGAAGGAGTTCTTAAGCATAAAGATATTACTAATGCTTCTTTGACTATTGCAGGTGGCTTTGATAAACGGTTGAAGGAGAATGTGGAATACTTAGAAGAGCTTAAAGATTTAGCTGAAAAGGAAGGAGTCTCTAATAAAATAAGATTCATCACGTCTTGCTCTACAGCTGAAAGGAATGAACTTCTTTCTGAATGCTTGTGTGTCCTTTACACGCCAAAGGATGAGCACTTTGGCATTGTTCCTTTGGAGGCAATGGCAGCTTATAAACCTGTTATTGCATGCAATAGTGGTGGCCCTGTGGAGTCAATTAAGAATGGTGTAACGGGATTCCTTTGTGATCCTACACCACAGGAGTTTTCTTTAGCAATGGCTAAGCTCATAAATGATCCCCAGGAGGCAGAAAGAATGGGGAGAGAAGCTAGGAGGCATGTTGCTGAGTCATTCTCTACAAAGTCATTTGGCCAGCATCTAAATAGATATCTAGTTGACATTCACCGGGGAAAGGAGGATTGA 1224 0.4044 MAKGATSKLNIAIIHPDLGIGGAERLIVDAAVELASQGHKVHVFTAHHDKNRCFEETVAGTFPVTVHGSFLPRHIFYRLHALCAYLRCLFVAFCVLFMWHSFDVILADQVSVVIPILKLKRSTKVVFYCHFPDLLLAQHSTFIRRMYRKPIDLAEEITTGMADLILVNSKFTASTFANTFKYLDAKGIRPAVLYPAVNVDQFNEPSSFKLNFLSINRFERKKNIQLAISAFAMLNSPEGVLKHKDITNASLTIAGGFDKRLKENVEYLEELKDLAEKEGVSNKIRFITSCSTAERNELLSECLCVLYTPKDEHFGIVPLEAMAAYKPVIACNSGGPVESIKNGVTGFLCDPTPQEFSLAMAKLINDPQEAERMGREARRHVAESFSTKSFGQHLNRYLVDIHRGKED 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g02162 407 Coils Coil 258 278 - -
Gma12g02162 407 Pfam Glycosyl transferases group 1 212 379 IPR001296 GO:0016757
Gma12g02162 407 Gene3D Glycogen Phosphorylase B; 206 401 - -
Gma12g02162 407 PANTHER ALPHA-1,3/1,6-MANNOSYLTRANSFERASE ALG2 6 404 IPR027054 GO:0004378|GO:0006486
Gma12g02162 407 Gene3D Glycogen Phosphorylase B; 10 205 - -
Gma12g02162 407 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 10 396 - -
Gma12g02162 407 Pfam Glycosyltransferase Family 4 20 200 IPR028098 -
Gma12g02162 407 CDD GT4_ALG2-like 9 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g02162 Gma-Chr12 42508142 42512273 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g02162 1 407 Glycosyltransferase AT1G78800 77.017 0.0 664
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g02162 K03843 - gmx:100809168 816.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g02162 12 42508142 42512273 Gma12g02162 12 42508142 42512273 ECH