Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g02156 ATGGCTACTTCCATTAACAGCAGCAGTGCTCTGGGGTGGAAACATTCCTCCTTGTTCGTACAATCTAATAATGGCTTTAACGTGGCTTCGCCTCCTTTCAAACATAAACCGCCACGCTCCTCCAAGTTTTCTCTCACTTGCTCTGCCGCTTCCTCTTCTTCTGATCCACTATTGGTTAAGGCTGCTAGGGGGGATCCTGTTAGTCGTCCTCCGGCATGGATGATGCGCCAGGCCGGAAGGTACATGGCTGTTTACAAAAAGCTTGCTGAGAAATATCCATCCTTCCGAGAGAGGTCAGAGACAACTGATCTCATTGTGGAAATTTCTTTGCAGCCTTGGAATGCTTTCAGGCCTGATGGAGTAATTATCTTCTCGGACATCCTTACACCACTTCCTGCGTTTGGAGTTGATTTTGACATAGAAGAAGTAAGGGGACCTGTTATACATTCGCCCATTCGTTCTGAGGAAGGATTAAAGGTTTTACATCCAATTGACCTGGACAGGCTTAAATTTGTTGGAGATTCACTAAAGATACTGCGCCAAGAGGTTGGTGGTCATGCAGCTGTTTTGGGTTTTGTGGGAGCACCTTGGACAATAGCAACATATATAGTGGAAGGGGGTACAACACGCACATATACAACCATTAAGAGCATGTGCCACACTGCCCCACATGTATTGAGGACTTTGCTTTCTCATTTGACGCAGGCAATAGCTGATTACGTTATTTTCCAAGTGGAGTCTGGGGCTCATTGCATACAAATATTTGATTCATGGGGTGGACAACTACCACCTGAAATGTGGGAACGCTGGTCAAAGCCTTATATCAAAGAGATTGTAAATTTGGTCAAGAAAAAATGCCCTGGGGTACCAATTGTTCTTTATATAAACGGAAATGGTGGTCTTCTTGAGCGTATGAAAGACACCGGAGTTGATGTTATAGGGCTAGACTGGACAGTGGATATGGCAGATGGAAGAAGAAGATTGGGTAGTGGGATAGGTGTTCAGGGAAATGTGGACCCTGCCTACTTATTCTCCCCTCTTGATGCCCTGACTGAAGAAATTCAGAGGGTTGTGAGGTGTGCGGGACCTAGACGGCATATCCTTAATCTCGGACATGGTGTTCTTGTTGGCACACCTGAAGAAGCTGTTGCACATTTCTTTGAAGTAGCTAGGAGCTTGCAGTTTGACACACTTTTTCAAAACAATACTGCAAAAGGCCCTAATCTTGTAACTTAA 1236 0.4506 MATSINSSSALGWKHSSLFVQSNNGFNVASPPFKHKPPRSSKFSLTCSAASSSSDPLLVKAARGDPVSRPPAWMMRQAGRYMAVYKKLAEKYPSFRERSETTDLIVEISLQPWNAFRPDGVIIFSDILTPLPAFGVDFDIEEVRGPVIHSPIRSEEGLKVLHPIDLDRLKFVGDSLKILRQEVGGHAAVLGFVGAPWTIATYIVEGGTTRTYTTIKSMCHTAPHVLRTLLSHLTQAIADYVIFQVESGAHCIQIFDSWGGQLPPEMWERWSKPYIKEIVNLVKKKCPGVPIVLYINGNGGLLERMKDTGVDVIGLDWTVDMADGRRRLGSGIGVQGNVDPAYLFSPLDALTEEIQRVVRCAGPRRHILNLGHGVLVGTPEEAVAHFFEVARSLQFDTLFQNNTAKGPNLVT 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g02156 411 PANTHER METHYLTETRAHYDROFOLATE:HOMOCYSTEINE METHYLTRANSFERASE RELATED 34 405 - -
Gma12g02156 411 SUPERFAMILY UROD/MetE-like 57 393 IPR038071 -
Gma12g02156 411 CDD URO-D 60 392 IPR006361 GO:0004853|GO:0006779
Gma12g02156 411 TIGRFAM hemE: uroporphyrinogen decarboxylase 58 391 IPR006361 GO:0004853|GO:0006779
Gma12g02156 411 ProSitePatterns Uroporphyrinogen decarboxylase signature 1. 71 80 IPR000257 GO:0004853|GO:0006779
Gma12g02156 411 ProSitePatterns Uroporphyrinogen decarboxylase signature 2. 190 206 IPR000257 GO:0004853|GO:0006779
Gma12g02156 411 PANTHER UROPORPHYRINOGEN DECARBOXYLASE 1, CHLOROPLASTIC 34 405 - -
Gma12g02156 411 Gene3D - 46 395 IPR038071 -
Gma12g02156 411 Hamap Uroporphyrinogen decarboxylase [hemE]. 54 394 IPR006361 GO:0004853|GO:0006779
Gma12g02156 411 Pfam Uroporphyrinogen decarboxylase (URO-D) 57 392 IPR000257 GO:0004853|GO:0006779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g02156 Gma-Chr12 42456801 42460510 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g02156 K01599 - gmx:100807032 810.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g02156 12 42456801 42460510 Gma12g02156 12 42456801 42460510 ECH