Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g02154 ATGTCCAGCAAGGGAAAGGAGGTAGCAGAAGGATCATCAACAACAAGACCCTCTCATGGTGGTGATGATGATCATCATCACAATCAACAACAACAGTTACCACTGAGTCGATATGAGTCTCAGAAGAGAAGGGATTGGAACACTTTTGGACAGTACCTGAGGAACCAAAGGCCTCCAGTGGCACTCTCACAGTGCAGCTCCAACCATGTTCTTGAGTTCCTTCGCTACTTGGACCAGTTTGGGAAGACCAAAGTGCACTCACAAGGGTGTTTGTTCTTTGGGCAAACTGAGCCACCAGGACCCTGCACTTGCCCTCTCAGACAAGCTTGGGGGAGCCTTGATGCTCTCATTGGAAGGTTGAGAGCTGCATATGAAGAAAATGGAGGCCTTCCTGAGACCAATCCCTTTGCAAGTGGCGCCATAAGAGTCTATCTTAGAGAGGTGAGAGATTCTCAATCTAAGGCTAGAGGAATCCCTTATAAGAAGAAAAAGAAGAAGAGGAATGTTATCAAGCCCAACGGAGACACCTCCTCCTCAAACTTGCCTATGCAGTAA 555 0.4757 MSSKGKEVAEGSSTTRPSHGGDDDHHHNQQQQLPLSRYESQKRRDWNTFGQYLRNQRPPVALSQCSSNHVLEFLRYLDQFGKTKVHSQGCLFFGQTEPPGPCTCPLRQAWGSLDALIGRLRAAYEENGGLPETNPFASGAIRVYLREVRDSQSKARGIPYKKKKKKRNVIKPNGDTSSSNLPMQ 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g02154 184 MobiDBLite consensus disorder prediction 1 40 - -
Gma12g02154 184 MobiDBLite consensus disorder prediction 152 184 - -
Gma12g02154 184 PANTHER PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 2 179 - -
Gma12g02154 184 Pfam ALOG domain 29 150 IPR006936 -
Gma12g02154 184 MobiDBLite consensus disorder prediction 1 16 - -
Gma12g02154 184 ProSiteProfiles ALOG domain profile. 37 164 IPR006936 -
Gma12g02154 184 PANTHER PROTEIN G1-LIKE2 2 179 IPR040222 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g02154 Gma-Chr12 42433791 42434345 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g02154 - - gmx:100806493 358.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01145 12 14308344 14313944 Gma12g02154 12 42433791 42434345 ECH
Gma06g02537 06 48328860 48332526 Gma12g02154 12 42433791 42434345 ECH
Gma12g01987 12 40452383 40452910 Gma12g02154 12 42433791 42434345 ECH
Gma13g02572 13 40570725 40575216 Gma12g02154 12 42433791 42434345 ECH
Gma12g02154 12 42433791 42434345 Gma08g01068 08 9049097 9053434 ECH
Gma12g02154 12 42433791 42434345 Gma12g02154 12 42433791 42434345 ECH