Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g02153 ATGGCGACCAGGAACTTGGAAAAGATGGCATCCATTGATGCACAGCTTAGGCAATTGGCTCCTGCCAAAGTGAGTGAGGATGACAAACTGATTGAGTATGATGCTCTTCTGCTGGATCGGTTCCTTGATATCCTTCAAGATTTACATGGGGAGGATCTGAAGGAAACAGTTCAAGAAGTGTATGAACTTTCAGCTGAGTATGAAGGAAAGCATGACCCTAAGAAACTGGAAGAACTTGGAAATTTGATAACCAGTTTGGATGCTGGGGACTCTATTCTTGTTGCCAAGTCCTTTTCCCACATGCTTAATTTGGCCAACTTGGCTGAAGAGGTCCAGATTTCTCGCCGCCGAAGAAACAAGTTGAAGAAAGGGGATTTTGCAGATGAGAACAATGCAACTACAGAATCAGACATTGAAGAAACTCTCAAGAAACTTGTATTTGACTTGAAGAAGTCTCCTCAGGAAGTTTTTGATGCACTGAAAAACCAGACTGTTGATTTGGTTCTTACTGCTCATCCTACTCAATCAATTCGTAGATCTTTGCTTCAAAAGCATGGAAGGATAAGGAATTGTTTATCTCAATTGTATGCCAAAGACATTACTCCTGATGATAAGCAGGAGCTTGATGAGGCTCTACAAAGGGAGATTCAAGCTGCCTTCCGTACAGATGAAATCAGGAGGACCCCTCCAACACCACAAGATGAGATGAGAGCAGGGATGAGCTACTTCCATGAAACAATTTGGAACGGTGTTCCCAGATTTCTGCGCCGTGTAGACACAGCTTTGAACAATATCGGGATTAAAGAGCGTGTTCCTTATAATGCTCCCCTTATTCAATTTTCTTCTTGGATGGGGGGTGATCGCGATGGTAATCCAAGAGTAACTCCTGAAGTGACAAGGGATGTTTGCTTATTGGCTAGAATGATGGCTGCTAATTTGTATTATTCCCAGATAGAAGATCTTATGTTTGAGCTCTCTATGTGGCGCTGCAATGATGAACTACGCGTTCGTGCAGAAGAACTTCACAGGTCTTCCAAGAAAGATGAAGTTGCAAAACACTATATAGAATTTTGGAAAAAGGTTCCCCCAAATGAACCATATCGTGTGGTACTCGGTGAAGTAAGGGATAGGCTCTATCAGACTCGTGAGCGTTCTCGCCATTTGCTTTCTAATGGGTACTCTGACATTCCAGAGGAAGCCACTTTCACCAATGTTGAGGAGTTCCTGGAATCTCTTGAACTATGTTACAGATCACTATGTGCTTGTGGTGATAGAGCAATTGCTGATGGAAGCCTTCTTGATTTCATGAGACAAGTCTCCACTTTTGGACTGTCACTAGTGAGGCTTGATATCAGGCAAGAGTCAGATCGTCACACTGATGTGCTGGATGCCATTACCAAACACTTGGAAATTGGCTCGTACCAGGAATGGTCTGAAGAGAAAAGACAGGAATGGTTGTTGTCTGAGTTAAGTGGCAAAAGGCCTCTATTTGGACCTGACCTTCCTCAAACTGAAGAAATTAGAGATGTTTTGGACACATTTCATGTCATAGCAGAACTACCACCAGACAACTTTGGAGCCTATATCATATCAATGGCAACTGCACCATCTGATGTGCTTGCAGTTGAGCTTCTACAACGTGAATGTCACATCAAGCATCCCTTAAGAGTTGTGCCATTGTTTGAGAAGCTAGCTGATCTAGAGGCTGCTCCTGCTGCTCTGGCACGGTTGTTCTCGATAGACTGGTACAGAAATAGGATCAATGGGAAGCAAGAAGTGATGATTGGATACTCAGATTCAGGGAAAGATGCTGGGAGGTTCTCTGCAGCATGGCAGCTATATAAGGCTCAGGAGGAACTTATAAATGTTGCCAAGAAATTTGGTGTTAAGCTAACCATGTTCCATGGTCGCGGTGGAACTGTTGGAAGAGGAGGTGGACCTACTCATCTTGCTATTCTGTCTCAACCTCCAGACACAATCCATGGATCACTTCGTGTGACAGTCCAAGGTGAAGTCATTGAGCAATCATTTGGAGAACAACACTTGTGCTTTAGAACACTACAACGTTTCACTGCCGCCACTCTAGAACATGGCATGCACCCCCCAATTTCGCCAAAACCAGAATGGCGTGCTTTGATGGATCAGATGGCTGTCATTGCTACTGAGGAATACCGTTCCATTGTATTCAAGGAACCACGCTTTGTTGAGTATTTCCGCCTGGCTACACCAGAGTTGGAGTATGGAAGGATGAATATTGGAAGTCGACCAGCAAAGAGAAGACCTAGTGGAGGCATTGAAACACTGCGTGCAATACCTTGGATTTTTGCATGGACTCAGACAAGGTTTCATCTTCCAGTGTGGCTAGGCTTTGGAGCAGCATTTAAAAAAGTCATTGAGGAAAATGTTAAGAATCTCAATATGCTGCAAGAGATGTACAATCAATGGCCTTTCTTTAGGGTCACACTTGATTTGGTGGAAATGGTGTTTGCCAAAGGAGATCCGAAAATTGCCGCTCTGAATGATAGACTCCTTGTTTCAAAGGATCTGTGGCCGTTTGGGGATCAATTGAGGAACAAATATGAAGAAACTAGGAAACTCCTACTTCAGGTGGCTGGACACAAGGAAATTCTTGAAGGGGACCCTTACTTGAAGCAAAGACTCAGGCTTCGTCATGCTCCCATTACCACCCTCAATATTGTCCAAGCTTACACATTGAAACGTATCCGTGATCCTAACTACAATGTGAAGGTGCGCCCCCGCATATCAAAGGAATCTGCAGAGGCAAGCAAATCAGCTGATGAACTTGTCAAATTGAACCCAACAAGTGAATATGCCCCTGGTTTGGAAGACACACTCATTCTCACTATGAAGGGTATTGCTGCTGGCATGCAGAACACTGTAAGAGAGAAAAGAGAAAAGAAGGAAGCAGCAGCAGAGACAAAAGTGAAGAGTTTGCTTTGCGAGGAAATCGTGATCGCAATGGCGCTCTCCGCCGTGAGGCAGCGGCGCTCGGAGCCGTCGGATCCGTCACCATCAGAACCGTACACGAAGCTGGACAAGCCCGAGAAAGCGGAGGAGAAAGACGAAGGCTTGGGGTGGGTTTTTCCGTTTGTGGCTCTTGGATTATTGAGGTACATGAGTGCCACCTCCAACATCATCCACGATTGCGACGAGGTCTTCAATTACTGGGAGCCCCTTCATTTCCTTCTCTACAAAACTGGCTTCCAGACATGGGAATACAGTTCACAGTTTGCTCTTCGGTCATATTTGTACCTTTTATTTCACGAAATAGTGGGTCGACCAGCTTCATGGTTGTTTAGTGAGGACAAAGTGAGAGTGTTCTATGCTGTGAGATTCTTTCTCGGTCTTCTCTCTGTTTTAACTGATACTGTTCTTGTGGTAGCTCTTTCAAGAAAGTATGGAAAACGACTTGCTACGTATGCACTTGCTATGCTGTGCTTAACCAGTGGCTGTTTCTTTGCTAGCACTAGTTTCTTGCCGAGTTCGTTTTCTATGTATGCAATATCTCTGGCATCAGGTTTATTTCTTCTGGATAAGCCTGCTGCGGCAATTTCTGTTGCTGTTATTGGTGTAATACTCGGCTGGCCATTCTCAATCTTGGCTTTCCTTCCAGTGACACTATATTCTCTATCTAGAAAATTCAAAGAGGCATTTATTTCTGCGGCTGTCACATCGATTATTCTTCTTGCATTGTCAATAGTTACGGACTTTTACTACTATGGAAAATGGACTTCATCTGTCTTGAATCTTTTGATATACAACGTAGCTGGAGGTGGTGAAAGCCATCTGTATGGGACTGAAGGGCCTCTGTATTATCTGAGGAATGGATTTAACAATTTCAACTTTTGTTTTGTTCTTGCTCTGCTGTTCTTGGGGATTTTGCCTATTGCAAAGAAGAAATATGCACCAGACCTACTGATTGTGATATCTCCTATATATATTTGGCTGGGGTTTATGTCTTTGCAGCCACACAAAGAAGAAAGGTTCCTTTATCCAATATATCCACTTATTTGTGTAGCTGCTTCAGCTGTCATTGAGAGCTTCCCTGATTTTTTCCGTAGCAAATATAATCCATACGATCGTTCTATAATAGTGACGGTTGCCAAAGTTATGAGACCAGTGGTTCTTAGCCTTATACTATATGCCTCTCATGCCCGTACATTTTCTCTGATTAATGGTTACTCAGCTCCCTTGGAGGTTTACAAGATCTTGGAACACCATGACGCAGAAAACAATTCTGTACTTTGCATTGGAAGTGAATGGCATCGCTTTCCATCATCATTTTTCATCCCAGATTATGTAGGACAAGTTCAATGGATTGACGATGGATTCCGAGGTCTTCTTCCCTTCCCATTTAATTCTACCCTGGGGGGGACTGCAGCAGCACCACCATATTTCAACGACAAAAACATGGCATCAGACAAGCAATATCTCCATGATGTTGTTGCTTGCACTTTCCTTGTCGAGCTGCAGCTAAAGCGGCCTTACCTGACTCGTGGAAGTGACTTGTCAACATGGGAGCCTATTGCTGCATTGCCTTATCTGGACAGGGAGCTTTCACCAGCACTGTATAGGTCCTTTTTCATTCCTTACCTTTGGCAAGAGAAGAATGTTTTTGGCATGTATAAGCTGCTTAAAAGAAGAACCACCTGA 4674 0.4377 MATRNLEKMASIDAQLRQLAPAKVSEDDKLIEYDALLLDRFLDILQDLHGEDLKETVQEVYELSAEYEGKHDPKKLEELGNLITSLDAGDSILVAKSFSHMLNLANLAEEVQISRRRRNKLKKGDFADENNATTESDIEETLKKLVFDLKKSPQEVFDALKNQTVDLVLTAHPTQSIRRSLLQKHGRIRNCLSQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRTPPTPQDEMRAGMSYFHETIWNGVPRFLRRVDTALNNIGIKERVPYNAPLIQFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANLYYSQIEDLMFELSMWRCNDELRVRAEELHRSSKKDEVAKHYIEFWKKVPPNEPYRVVLGEVRDRLYQTRERSRHLLSNGYSDIPEEATFTNVEEFLESLELCYRSLCACGDRAIADGSLLDFMRQVSTFGLSLVRLDIRQESDRHTDVLDAITKHLEIGSYQEWSEEKRQEWLLSELSGKRPLFGPDLPQTEEIRDVLDTFHVIAELPPDNFGAYIISMATAPSDVLAVELLQRECHIKHPLRVVPLFEKLADLEAAPAALARLFSIDWYRNRINGKQEVMIGYSDSGKDAGRFSAAWQLYKAQEELINVAKKFGVKLTMFHGRGGTVGRGGGPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEQHLCFRTLQRFTAATLEHGMHPPISPKPEWRALMDQMAVIATEEYRSIVFKEPRFVEYFRLATPELEYGRMNIGSRPAKRRPSGGIETLRAIPWIFAWTQTRFHLPVWLGFGAAFKKVIEENVKNLNMLQEMYNQWPFFRVTLDLVEMVFAKGDPKIAALNDRLLVSKDLWPFGDQLRNKYEETRKLLLQVAGHKEILEGDPYLKQRLRLRHAPITTLNIVQAYTLKRIRDPNYNVKVRPRISKESAEASKSADELVKLNPTSEYAPGLEDTLILTMKGIAAGMQNTVREKREKKEAAAETKVKSLLCEEIVIAMALSAVRQRRSEPSDPSPSEPYTKLDKPEKAEEKDEGLGWVFPFVALGLLRYMSATSNIIHDCDEVFNYWEPLHFLLYKTGFQTWEYSSQFALRSYLYLLFHEIVGRPASWLFSEDKVRVFYAVRFFLGLLSVLTDTVLVVALSRKYGKRLATYALAMLCLTSGCFFASTSFLPSSFSMYAISLASGLFLLDKPAAAISVAVIGVILGWPFSILAFLPVTLYSLSRKFKEAFISAAVTSIILLALSIVTDFYYYGKWTSSVLNLLIYNVAGGGESHLYGTEGPLYYLRNGFNNFNFCFVLALLFLGILPIAKKKYAPDLLIVISPIYIWLGFMSLQPHKEERFLYPIYPLICVAASAVIESFPDFFRSKYNPYDRSIIVTVAKVMRPVVLSLILYASHARTFSLINGYSAPLEVYKILEHHDAENNSVLCIGSEWHRFPSSFFIPDYVGQVQWIDDGFRGLLPFPFNSTLGGTAAAPPYFNDKNMASDKQYLHDVVACTFLVELQLKRPYLTRGSDLSTWEPIAALPYLDRELSPALYRSFFIPYLWQEKNVFGMYKLLKRRTT 1557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g02153 1557 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 1 966 - -
Gma12g02153 1557 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 1 966 IPR021135 GO:0006099|GO:0008964|GO:0015977
Gma12g02153 1557 Coils Coil 104 124 - -
Gma12g02153 1557 PRINTS Phosphoenolpyruvate carboxylase signature 765 791 IPR021135 GO:0006099|GO:0008964|GO:0015977
Gma12g02153 1557 PRINTS Phosphoenolpyruvate carboxylase signature 220 236 IPR021135 GO:0006099|GO:0008964|GO:0015977
Gma12g02153 1557 PRINTS Phosphoenolpyruvate carboxylase signature 591 611 IPR021135 GO:0006099|GO:0008964|GO:0015977
Gma12g02153 1557 PRINTS Phosphoenolpyruvate carboxylase signature 167 180 IPR021135 GO:0006099|GO:0008964|GO:0015977
Gma12g02153 1557 PRINTS Phosphoenolpyruvate carboxylase signature 442 462 IPR021135 GO:0006099|GO:0008964|GO:0015977
Gma12g02153 1557 PRINTS Phosphoenolpyruvate carboxylase signature 280 295 IPR021135 GO:0006099|GO:0008964|GO:0015977
Gma12g02153 1557 PRINTS Phosphoenolpyruvate carboxylase signature 633 662 IPR021135 GO:0006099|GO:0008964|GO:0015977
Gma12g02153 1557 Gene3D Phosphoenolpyruvate/pyruvate domain 308 445 - -
Gma12g02153 1557 Pfam Phosphoenolpyruvate carboxylase 35 966 IPR021135 GO:0006099|GO:0008964|GO:0015977
Gma12g02153 1557 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 33 966 IPR015813 GO:0003824
Gma12g02153 1557 Hamap Phosphoenolpyruvate carboxylase [ppc]. 23 967 IPR022805 GO:0006099|GO:0008964|GO:0015977
Gma12g02153 1557 MobiDBLite consensus disorder prediction 1001 1024 - -
Gma12g02153 1557 ProSitePatterns Phosphoenolpyruvate carboxylase active site 2. 593 605 IPR033129 -
Gma12g02153 1557 ProSitePatterns Phosphoenolpyruvate carboxylase active site 1. 168 179 IPR018129 -
Gma12g02153 1557 Pfam Alg9-like mannosyltransferase family 1037 1438 IPR005599 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g02153 Gma-Chr12 42402335 42415397 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g02153 994 1554 Glycosyltransferase AT1G16900 72.359 0.0 827
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g02153 K01595 - gmx:100805069 1895.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g02153 12 42402335 42415397 Gma12g02153 12 42402335 42415397 ECH