Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g02147 ATGGCATTGCGTCATTTACGATTCTTCCCTCACACACTTCCTCTAACTCTCACTCCCACTCCCAATCCCAATAACAGTAACCGTTTTTCCTTCTTCACTCCCTCACTCTCTTCCACCACGCTCATGGCCACTGCTCACAAGGTCCTGGTTCCCATCGCCGACGGCACCGAGCCCATGGAGGCTGTCATCACCATCGACGTCCTCCGACGCTCCGGCGCCGACGTCACCGTCGCCTCCGCCTCCGACAACCTCGCCGTCCAAGCTCTCCATGGCGTCAAGATCATCGCCGACGCCCCTGTCCGAGACGTCGCTGCCACCTCCTTTGACCTCGTCGCTCTCCCCGGAGGGTTACAGGGTGTTGAGAATCTGAGAGACTGTAAAGTTCTGGAAGGGTTGGTGAAGAAGCATGTTGAGGACGGACGGCTCTATGCGGCGGTGTGTGCTGCTCCTGCGGTGGTGCTCGGACCTTGGGGTTTGCTGAATGGGAAAAAGGCGACTTGTTATCCTGCATTGATGGAGAAATTGGCCGCTTATGCAGCCGCTACTTCTGAGTCTAGGGTGCAGGTGGATGGCAGAGTTGTGACCAGTCGTGCGCCGGGAACTACCATGGAGTTTGCCATCACTTTGATTGAGCAGTTAATTGGAAAAGAGAAAGCAGATGAAGTTGCAGGTCCATTGGTCATGCATTCCAATCATGATGATGAACATACTTTTAAGGAGTTTAACCCAGTGCAGTGGACATCAGACAATCCACCCAAGATTCTTGTACCAATTGCAAATGGTTCAGAGGAAATGGAAGCTGTTATCATCATTGATATTCTGCGAAGAGCAAAGGCAAAGGTTGTGGTTGCTTCTGTTGAGGATAAACTAGAGATTGTGGCATCACGCAAAGTTAAACTGGAGGCAGACATGCTCCTTGATGAAGCAGCCAAACTTTCATATGACCTTATTGTGTTACCTGGAGGACTTGGTGGTGCCCAAACTTTTGCAAACTCAGAAACCTTGGTGAGTTTGCTGAAAAAGCAAAGAGAATCAAACATATATTATGGAGCAATATGTGCATCCCCGGCTTTAGTCTTGGAGCCCCATGGCTTGCTGAAGGGTAAAAAGGCCACTGCCTTTCCTGTAATGTGCAACAAGTTATCAGATCAGAGTGAAGTAGAAAACAGGGTGGTAGTTGATGGCAATCTTATTACCAGCAGAGGTCCAGGAACCTCCATTGAGTTTGCATTAGCTATTGTGGAGAAGCTGTTTGGACGCAAGTTAGCACTAGAACTTGCAAAGGCAGTAGTGTTTGCACGCCCTTAG 1308 0.4985 MALRHLRFFPHTLPLTLTPTPNPNNSNRFSFFTPSLSSTTLMATAHKVLVPIADGTEPMEAVITIDVLRRSGADVTVASASDNLAVQALHGVKIIADAPVRDVAATSFDLVALPGGLQGVENLRDCKVLEGLVKKHVEDGRLYAAVCAAPAVVLGPWGLLNGKKATCYPALMEKLAAYAAATSESRVQVDGRVVTSRAPGTTMEFAITLIEQLIGKEKADEVAGPLVMHSNHDDEHTFKEFNPVQWTSDNPPKILVPIANGSEEMEAVIIIDILRRAKAKVVVASVEDKLEIVASRKVKLEADMLLDEAAKLSYDLIVLPGGLGGAQTFANSETLVSLLKKQRESNIYYGAICASPALVLEPHGLLKGKKATAFPVMCNKLSDQSEVENRVVVDGNLITSRGPGTSIEFALAIVEKLFGRKLALELAKAVVFARP 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g02147 435 Gene3D - 246 434 IPR029062 -
Gma12g02147 435 Gene3D - 40 241 IPR029062 -
Gma12g02147 435 CDD GATase1_DJ-1 48 213 - -
Gma12g02147 435 CDD GATase1_DJ-1 254 417 - -
Gma12g02147 435 Pfam DJ-1/PfpI family 46 212 IPR002818 -
Gma12g02147 435 Pfam DJ-1/PfpI family 253 415 IPR002818 -
Gma12g02147 435 PANTHER BNAA06G01020D PROTEIN 43 430 - -
Gma12g02147 435 TIGRFAM not_thiJ: DJ-1 family protein 253 428 IPR006287 -
Gma12g02147 435 TIGRFAM not_thiJ: DJ-1 family protein 47 224 IPR006287 -
Gma12g02147 435 SUPERFAMILY Class I glutamine amidotransferase-like 251 432 IPR029062 -
Gma12g02147 435 SUPERFAMILY Class I glutamine amidotransferase-like 46 234 IPR029062 -
Gma12g02147 435 PANTHER PROTEIN/NUCLEIC ACID DEGLYCASE DJ-1-RELATED 43 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g02147 Gma-Chr12 42324367 42327864 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g02147 K03152 - gmx:100803116 793.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g02147 12 42324367 42327864 Gma12g02147 12 42324367 42327864 ECH