Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g02141 ATGAGAAACATTTCCAGAGCACCATACTTAATCTTTCTCCTTTTATTACTAACAATTAAGCTAGTTTCAGATGGTGTTCATAATGTTCAACACAACGAAACTTCTTACTTAGTTCTTAAAGGAATTGATGATGAATCCTTTGAGGAATACTGCAAGCAAATGTACGGCTTCTTGCCATGCACAAACAATATTTTTGGCCATCTCTTTCTTATTTTGTTTAACTTATTTTTTAGGTCATCATGGCATTGGTGTGAAGCATTTATAGTCACTACACTTTGCAGGCAATTATATAGGGAAATAGATCAAGATGGAAGCAGTGGTATATCAGCTTCTGAAGTGAAAGTCCTTCTGCTCAAAAACAAAATGTCTGGGCTTTCAGGTAGTAAAGAAGTTGCTCAAAGTCAGGTATCTGTTGGAATGGGACTGCTAGCTGGGTCAACGACGCTGCTTCAGACTATAATATGGGGGACCTGTGTAATTGTTGGCAAGTGTGACATTGAGGGTTCAATTGCAATAGATTCACGAGACACAAGGGGATTTAGTTTAACTGGTTCTGGTGTTAGTACTGATATTTGGACAAGTTATGCTGCAAGGATTATGGTTATATCTGTCCTTCCATTTGTGATCGTTCAATTACCACAAATTCTCAATTCAACTTCAGGAAGGCACTTGGCTGTTTTGATTGCTCTCATTGTGTCTCTCGGTTTACTGATTGCTTGTTTTTCTTTTTTTCATCAGCCAGCACCATTGTTGTTTAACTCTGATGATACGCATTCTTTTTTGTTGGATATTTTCCAGCCCTGGATACAAAGGAGGAAACTTGAATTTATTAAACACAAGCATGTTATCTTAGGACTTTTGACACATTTAAAGAAGCGTGCATTGGGAAGGCTGCTGATTGAAGATGGTGAACCTGACAAAGAAGTCGTTAGAAAATTGTTTCAAACCATTGATGAAAATCAAGATGGCAATCTTACTCATAATGAATTGAGAGCACTGGTTATTGGAATTCAGTTTGAGGAGACCTGGATCATGATGATGCTATGGCTTCAAAGGGCCCAGCGTGCTCGAGTTGCATCTGGTGATGCTGGTCCACACACAATGAAGTTCTTAACTGATTTCCACAAAGAAACAAAGAGGGAACATGATCTGCTGGATGTGGGAGGTCAGGGTAATGAAGAGGCTGAGGGCATTGAGAATGCCAAATGGACTTCCATCAAAGCAGTTCTGCTTCTGCTACTGGGTACTATTATTGCTGCTGCATTTGCTGATCCTCTGATTGATGCAGTGGATAACTTTTCTGAGGCTACAAGTGTTCCTGCTTTCTTCATTTCCTTCATTTTTCTGCCTTTAGCAACCAATTCAAGTGAAGCAGTGTCAGCAATAATTTTGCTAGTCGTGATAAGAGGCAAACTGCCTCATTAA 1425 0.3937 MRNISRAPYLIFLLLLLTIKLVSDGVHNVQHNETSYLVLKGIDDESFEEYCKQMYGFLPCTNNIFGHLFLILFNLFFRSSWHWCEAFIVTTLCRQLYREIDQDGSSGISASEVKVLLLKNKMSGLSGSKEVAQSQVSVGMGLLAGSTTLLQTIIWGTCVIVGKCDIEGSIAIDSRDTRGFSLTGSGVSTDIWTSYAARIMVISVLPFVIVQLPQILNSTSGRHLAVLIALIVSLGLLIACFSFFHQPAPLLFNSDDTHSFLLDIFQPWIQRRKLEFIKHKHVILGLLTHLKKRALGRLLIEDGEPDKEVVRKLFQTIDENQDGNLTHNELRALVIGIQFEETWIMMMLWLQRAQRARVASGDAGPHTMKFLTDFHKETKREHDLLDVGGQGNEEAEGIENAKWTSIKAVLLLLLGTIIAAAFADPLIDAVDNFSEATSVPAFFISFIFLPLATNSSEAVSAIILLVVIRGKLPH 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g02141 474 SUPERFAMILY EF-hand 92 337 IPR011992 -
Gma12g02141 474 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 15 463 IPR004713 GO:0006812|GO:0008324|GO:0016021
Gma12g02141 474 ProSiteProfiles EF-hand calcium-binding domain profile. 305 340 IPR002048 GO:0005509
Gma12g02141 474 PANTHER SODIUM/CALCIUM EXCHANGER NCL 15 463 - -
Gma12g02141 474 ProSitePatterns EF-hand calcium-binding domain. 318 330 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g02141 Gma-Chr12 42259881 42267625 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g02141 18 464 EF-hand Containing Proteins AT1G53210 49.177 1.58e-131 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g02141 - - gmx:100809896 567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g02141 12 42259881 42267625 Gma12g02141 12 42259881 42267625 ECH