LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma12g02136	ATGGAAGATGATCTGTTGGACACAGAAGACAGGAACAACAATGGCAGTTCCACCGCAAAGAAATCGAAGCAGCGGCGAAAGAGGAAGGAGTACATGGTGGACGAGGATGGGCAGGTGGGGGCACGAGAGAAGCTGGCAAAAAGAATCTTGTTGTCTCTGACGAGGCCTTCCTATGTTTTGGGATTGGGTCCCAAACCTCTTAGGGTGGAACACCGTGCAAGGTTGCGCTACCTGCTTCGGCGGCTCGTCAGCCAGCAtcattgggttgcagccagtggtgttctcagtgtctacttgaagggaacacttgatgatAACTCTCCCTACAGGAACCGTCTTAAGTTTTGGGTTTTACTGGAGCTTCTTAAGCATGTGGAAAACCACTCTATTAATCCAACACGAATCAAGAACCTCTATGATATTTGGTCTAAGAAAATTGGATCAATGAAGACTTGGCCAGTTGAGAGCAGATATGCAGTCCATTTGGAGTTCATGCTTTTCTGTCTTTTGCAAGGCAATGCTGAGGATGCATACCAGCTTGCTCTATGCCTTGGGCAAGAAAAAGGTGATATTGGTCCTATGTCAAAGATGATGATGGGTTTGACATTCTATGAGTTGTGGTATTCTTCTATCCCCAAAGAATTCCAGTGGAGAAATTCAGATCAGTTTGACTTGCAAGAGAACTCAGATATGGAGGGAACTTCATTCAACAATGAAACTGTACAGTCAGAGAGGTATAATTCAGTTGAATCCCACATGGCTGACTCCCAGTCCCAGCGTGATTCAGATGCCTCTGTCATGAATGATAAGAAGATATCTGGGGATGTTGTCTTCAATGAAGACATGGAGGTTGATGCTAATAAAAGAGAAAAACCACATCAGAACTTTCAGCCAGAAGGTTTTTACTTAAATTCTGAAGAGCATAAAGGATTTGGAGATCCTTTTTCTAACAATGGAGGTCTTACACAGGATATCTTGTATGGCCTTGGGGAACTTGATTTGTGGTTGCTACCCCTGCGTTTATCTGATGACCACAGTTTTGAGGAGTTCATGTATTTGCAAGGAAATCAGCCTAATGACTATTACAAAAATGCAGTGAAATATTTACAACTTGCACTTGACTCAGAACCTTCTGCTTCAGCAGCATTACTTCCATTGATACAGCTGTTGCTGATTGGAGGTCAAGTTGACGAGGCTCTAAATATGCTTGAGAAGCAATGTTGTAATTCAGCCTCTGTACTCCCAATAAGAGTAAGGGCTGCTCTCTTGGAGCGTTTTGATCGAAACAACTCTCTCCTGCTTCTTAGCTGTTTTGAGGATATATTGAAGAAGGATCCAACATGTAGTGACACCTTAGCAAAACTTATCAAGATGCACCAAAATGGAGACTATAGTCTTGTATCTCTGCTGGAAATGATTGCTTTACATTTAGATGCTACAGATGCAGAGTACAATACGTGGAAGGTGTTCTCTTCATGTTTCTTGAGACTGTCTTCCTACGAAGAAGACTGCATGTCTTCATGCCCCATTCAAAATGAAGATGGACATAAGCAACATTTTCCCCTTAACAAAACCCCTAAAATATTTACGGATGGTATATCAGGAAAATCTTGGAGGCTTCGCTGTAGGTGGTGGCTAACTAAACATTTCAGCAATAGCAAGCTTGAATCCGAGATTAATACTGGTGACTTGCAGTTACTCACATACAAAGCGGCATGTGCATCGTATATGTATGGACGGGAATTCAGCTATGTTGCGAAGGCTTACTCTCATTTAGAAAAAGAAGATGATAAGGAGTTGCTATTGTTCTTGGATGAGCACAGGGGAAATTCATTTGGAATTTATCAAAAATTTCAAAAGAAATTTACACACATAATATGA	1881	0.4046	MEDDLLDTEDRNNNGSSTAKKSKQRRKRKEYMVDEDGQVGAREKLAKRILLSLTRPSYVLGLGPKPLRVEHRARLRYLLRRLVSQHHWVAASGVLSVYLKGTLDDNSPYRNRLKFWVLLELLKHVENHSINPTRIKNLYDIWSKKIGSMKTWPVESRYAVHLEFMLFCLLQGNAEDAYQLALCLGQEKGDIGPMSKMMMGLTFYELWYSSIPKEFQWRNSDQFDLQENSDMEGTSFNNETVQSERYNSVESHMADSQSQRDSDASVMNDKKISGDVVFNEDMEVDANKREKPHQNFQPEGFYLNSEEHKGFGDPFSNNGGLTQDILYGLGELDLWLLPLRLSDDHSFEEFMYLQGNQPNDYYKNAVKYLQLALDSEPSASAALLPLIQLLLIGGQVDEALNMLEKQCCNSASVLPIRVRAALLERFDRNNSLLLLSCFEDILKKDPTCSDTLAKLIKMHQNGDYSLVSLLEMIALHLDATDAEYNTWKVFSSCFLRLSSYEEDCMSSCPIQNEDGHKQHFPLNKTPKIFTDGISGKSWRLRCRWWLTKHFSNSKLESEINTGDLQLLTYKAACASYMYGREFSYVAKAYSHLEKEDDKELLLFLDEHRGNSFGIYQKFQKKFTHII	626

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma12g02136	626	Pfam	TAF RNA Polymerase I subunit A	82	590	IPR039495	GO:0000120\|GO:0006360
	Gma12g02136	626	PANTHER	TAF RNA POLYMERASE I SUBUNIT A	10	621	-	-
	Gma12g02136	626	MobiDBLite	consensus disorder prediction	1	33	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma12g02136	Gma-Chr12	42210618	42216956	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma12g02136	-		-	gmx:100819662	1204.89

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma12g02136	12	42210618	42216956	Gma12g02136	12	42210618	42216956	ECH