Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g02110 ATGGGGTTCTTAAACGTAGAGAAGAAATGGTTATATCCTTTCATAGTGTGTTTTGCCATATGCATGCTCTTACTAGTCTCATCCTTCAACATGGATCTTGTCTCTTCAATTCACTCCATCAATTCACTGTTTTTCTTTCTCCCATCTCATTTACGCCCAAACCAAACTGAGCCGGGTTTTGTGGAGAGGAAGGCTTCTCCTGCTCCAGCGCCGGCTAGGCCTGTGCTTCCTCGTTTCGCTTATTTGATTTCAGGCTCCAAAGGTGATTTGGAAAAGCTTTGGAGAACCCTTCATGCACTTTATCATCCCCTAAACCATTATGTTGTTCATATGGACCTTGAGTCGCCGCTTGAGGAAAGGATGGAGATTGCACATAGAATTGAAAGACAACATGTCTTCGCTGAGGTTGGAAACGTTTTTGTAATCACAAAGGCTAACATGGTCACTTACCGAGGACCAACGATGGTTGCTAATACTCTTCATGCTTGTGCCATTCTTCTCAAGAGAAGTAAAGACTGGGATTGGTTTATTAATCTTAGTGCTTCAGACTATCCTCTTGTGACACAGGATGATCTGCTATATACTTTTTCAGATTTAGATAGAGGCCTTAACTTCATTGAGCACACAAGTCGGTTAGGGTGGAAGTTTGATAAACGAGCAATGCCTTTAATTGTAGACCCTGGGCTTTACATGTCAACCAAATCTGATGTATTTTGGGTCAATCCAAAGAGACCTTTGCCAACAGCATTTAAATTATTCACTGGTTCAGCATGGACGGTATTATCACACGACTTTGTTGAATATATTGTATGGGGATGGGACAATCTGCCAAGGACCCTTCTCATGTACTACACTAATTTTCTGTCTTCCCCTGAAGGCTACTTCCAGACTGTTGCATGCAATGCGCCAGAATGGGCTAAAACCCTTGTCAATAGTGACTTGCATTACATTGCCTGGGATGTCCCTCCTAAACAGCACCCTCACGTCCTTAACATCAACGACACAGACAAAATGGTTGAAAGTGGTGCTGCCTTTGCAAGAAAATTTAAGCAAGATGATCCAGCCTTGGATTGGATTGATAAAATGATTCTCCGCAAGAGAAATGGACTATTTCCACTCGGTGGTTGGTGCACCGGCAGACCCAAATGCTCCGAGATTGGGAACATTTATAAACTCAAACCTGGTCCGGGATCTCAAAGGCTTCATCGCCTTGTCGCGGGGCTAACTTTGAAGGCTAAATCTGGTGAGGATCAGTGTAAATAG 1263 0.4331 MGFLNVEKKWLYPFIVCFAICMLLLVSSFNMDLVSSIHSINSLFFFLPSHLRPNQTEPGFVERKASPAPAPARPVLPRFAYLISGSKGDLEKLWRTLHALYHPLNHYVVHMDLESPLEERMEIAHRIERQHVFAEVGNVFVITKANMVTYRGPTMVANTLHACAILLKRSKDWDWFINLSASDYPLVTQDDLLYTFSDLDRGLNFIEHTSRLGWKFDKRAMPLIVDPGLYMSTKSDVFWVNPKRPLPTAFKLFTGSAWTVLSHDFVEYIVWGWDNLPRTLLMYYTNFLSSPEGYFQTVACNAPEWAKTLVNSDLHYIAWDVPPKQHPHVLNINDTDKMVESGAAFARKFKQDDPALDWIDKMILRKRNGLFPLGGWCTGRPKCSEIGNIYKLKPGPGSQRLHRLVAGLTLKAKSGEDQCK 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g02110 420 PANTHER OS01G0201100 PROTEIN 4 420 - -
Gma12g02110 420 Pfam Core-2/I-Branching enzyme 79 338 IPR003406 GO:0016020|GO:0016757
Gma12g02110 420 PANTHER GLYCOSYLTRANSFERASE 4 420 IPR044610 GO:0015020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g02110 Gma-Chr12 41884910 41887034 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g02110 1 420 Glycosyltransferase AT3G15350 64.623 0.0 589
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g02110 - - gmx:100792706 870.152
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g02110 12 41884910 41887034 Gma12g02110 12 41884910 41887034 ECH