Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g02099 ATGGCCACCGTGCAACTCCAATCCCTAACCCTTGTTCGCTCCTCCGCACTCCCTTCCGCCACCTTCTCCCCTCCGATCGCCCTCTCCGGCCGCCGGAACTCCGCCGCGCTGCCGCGCTACGCCTGCCTCCGACTCCGACCCGCCGCCGAGACCTGTTTTCCGACTCGCGCCGCCTTGAGAACCGCTCCTCGCGGCGGAGGCGTCAAGTGCGAGGCAGGAGACACCGCCGTTGAAGTGGCTCCTATTACTGATGCAAATTGGCAATCACTTGTGCTTGAATCTGAGTCTCCAGTATTGGTTGAATTCTGGGCTCCATGGTGTGGTCCCTGCCGTATGATACATCCGATAATTGATGAGCTGGCAAAGGAATATGTTGGTAGGCTTAAGTGCTACAAACTCAATACTGATGAAAGCCCTTCAACCGCTACTCGGTACGGGATCCGAAGTATCCCAACTGTCATTATTTTCAAGAATGGTGAGAAGAAAGATACAGTTATTGGAGCTGTGCCCAAGACAACATTGACCTCAAGCATAGAAAAATTCTTGTGA 549 0.541 MATVQLQSLTLVRSSALPSATFSPPIALSGRRNSAALPRYACLRLRPAAETCFPTRAALRTAPRGGGVKCEAGDTAVEVAPITDANWQSLVLESESPVLVEFWAPWCGPCRMIHPIIDELAKEYVGRLKCYKLNTDESPSTATRYGIRSIPTVIIFKNGEKKDTVIGAVPKTTLTSSIEKFL 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g02099 182 CDD TRX_family 85 179 - -
Gma12g02099 182 PANTHER GEO12009P1 1 182 - -
Gma12g02099 182 ProSitePatterns Thioredoxin family active site. 99 117 IPR017937 -
Gma12g02099 182 TIGRFAM thioredoxin: thioredoxin 83 181 IPR005746 GO:0015035
Gma12g02099 182 PRINTS Thioredoxin family signature 98 106 - -
Gma12g02099 182 PRINTS Thioredoxin family signature 106 115 - -
Gma12g02099 182 PRINTS Thioredoxin family signature 146 157 - -
Gma12g02099 182 PANTHER THIOREDOXIN M-TYPE PROTEIN 1 182 - -
Gma12g02099 182 Pfam Thioredoxin 79 179 IPR013766 -
Gma12g02099 182 Gene3D Glutaredoxin 79 182 - -
Gma12g02099 182 ProSiteProfiles Thioredoxin domain profile. 70 182 IPR013766 -
Gma12g02099 182 SUPERFAMILY Thioredoxin-like 78 182 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g02099 Gma-Chr12 41780180 41783969 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g02099 K03671 - gmx:100526924 365.925
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g02099 12 41780180 41783969 Gma12g02099 12 41780180 41783969 ECH