Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g02095 ATGGCGAAGAAGAAGGAGAAGAAGGTGAACGTCTCCGGAAAACCTAAGCACTCTCTCGACGTAAACCGCAGCAATGACGCGAAGAAGGAGTCGCGCTCCGCCGCCACCGTGCGCCGCCTCAAGATGTACAACACCAGGCCCGTGCGCGACCGGAAGGGAAAAGTCGTATCCCACGAGCTTCAGTCCAAGGAGCTTCCCAGCACAAGAATCCAACCCGATCGTCGATGGTTCGGGAACACGCGTGTTGTGAATCAGAAAGAGCTTGAGTTTTTCCGAGAAGAGCTACAGAGCCGCATGTCTAGTAATTACAATGTAATTCTGAAGGAGAAGAAACTTCCGCTTTCGCTACTCAACGATCACCAGAAGCAAGCTAGAGTTCACCTGCTTGATAGAGAGCCTTTCCAGGATGCGTTTGGACCGAAGACTAAGAGGAAGCGCCCCATCCTCTTGGCGGCTGACTACGAGTCATTGCTGAAGAAAGCCGATGGGTCTCAGGATGCTTTTGAAGAGAAGTATGGTTCCAGTGTATCCGCGGAAGCTAATGATGAAGATGGATTTAGAGATTTAGTGCGACATACAATGTTCGAAAAGGGTCAGAGTAAACGCATATGGGGTGAGCTTTACAAAGTGATAGATTCTTCAGACGTGGTTGTCCAGGTTTTAGATGCAAGGGATCCACAAGGAACAAGATGCTATCATTTAGAGAAGCATTTGAAGGAAAATTGTAAGCACAAACACATGGTGCTTTTATTGAACAAGTGTGATCTAGTTCCTGCTTGGGCAACAAAAGGATGGCTTAGAGTTTTGTCAAAAGAATTTCCAACTCTAGCATTCCATGCAAACATTAACAAGTCCTTCGGAAAAGGTTCACTTCTATCAGTTCTGAGACAATTTGCTCGATTGAAACGTGATAAGCAAGCAATATCTGTTGGATTTGTTGGATACCCAAATGTTGGGAAGTCATCCGTAATCAACACATTGCGTACAAAGAATGTCTGCAAGGTTGCTCCAATTCCTGGGGAAACAAAAGTATGGCAGTATATAACCCTAACAAAGAGGATCTTTCTGATTGATTGTCCAGGTGTTGTCTACCACAACAATGATTCTGAAACAGATGTTGTGTTGAAGGGTGTGGTGCGTGTAACTAATTTGAAAGATGCTGCAGACCATATAGGTGAGGTTTTGAAACGTGTGAAGAAAGAGCATTTGGAGAGAGCATATAAAATAAAAGAGTGGGATGATGAGAATGACTTCTTACTGCAGCTTTGCAAATCAACTGGCAAACTTCTGAAGGGTGGTGAGCCTGACTTGATGACTGCGGCAAAGATGATACTTCATGACTGGCAGAGGGGTCGAATTCCCTTTTTTGTTCCCCCTCCTAGGCAGGAGGACTTGTCTGAGGAACCTAATGTTAATGGTGTTGACCTAGATGATTCAGTTGATGGCAACGAGGCTTCTGCTGCTATGAAGGCTATCGCAGATGTTCTTTCATCGCAGCAACAAATAAATGTACCTGTTCAGAATGATTTATATAGTGAGAAGGAGTTGAAGGGGGAAGCTACTGATCAACATCCAAACACTAATGCAAACGAAGAAATTCTGGCCCTTGATAGTAACACATCTGAAGAGGATCCAATCAGCGAGCCATAA 1650 0.4479 MAKKKEKKVNVSGKPKHSLDVNRSNDAKKESRSAATVRRLKMYNTRPVRDRKGKVVSHELQSKELPSTRIQPDRRWFGNTRVVNQKELEFFREELQSRMSSNYNVILKEKKLPLSLLNDHQKQARVHLLDREPFQDAFGPKTKRKRPILLAADYESLLKKADGSQDAFEEKYGSSVSAEANDEDGFRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYHLEKHLKENCKHKHMVLLLNKCDLVPAWATKGWLRVLSKEFPTLAFHANINKSFGKGSLLSVLRQFARLKRDKQAISVGFVGYPNVGKSSVINTLRTKNVCKVAPIPGETKVWQYITLTKRIFLIDCPGVVYHNNDSETDVVLKGVVRVTNLKDAADHIGEVLKRVKKEHLERAYKIKEWDDENDFLLQLCKSTGKLLKGGEPDLMTAAKMILHDWQRGRIPFFVPPPRQEDLSEEPNVNGVDLDDSVDGNEASAAMKAIADVLSSQQQINVPVQNDLYSEKELKGEATDQHPNTNANEEILALDSNTSEEDPISEP 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g02095 549 PRINTS GTP1/OBG GTP-binding protein family signature 310 330 IPR006073 GO:0005525
Gma12g02095 549 PRINTS GTP1/OBG GTP-binding protein family signature 356 371 IPR006073 GO:0005525
Gma12g02095 549 Pfam NGP1NT (NUC091) domain 42 166 IPR012971 -
Gma12g02095 549 MobiDBLite consensus disorder prediction 1 37 - -
Gma12g02095 549 PANTHER GTP-BINDING PROTEIN-RELATED 2 532 - -
Gma12g02095 549 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 204 365 IPR030378 GO:0005525
Gma12g02095 549 Gene3D - 365 457 IPR023179 -
Gma12g02095 549 PANTHER NUCLEOLAR GTP-BINDING PROTEIN 2 2 532 IPR024929 GO:0005730
Gma12g02095 549 Pfam 50S ribosome-binding GTPase 310 412 IPR006073 GO:0005525
Gma12g02095 549 MobiDBLite consensus disorder prediction 1 36 - -
Gma12g02095 549 MobiDBLite consensus disorder prediction 508 549 - -
Gma12g02095 549 CDD NGP_1 206 362 - -
Gma12g02095 549 MobiDBLite consensus disorder prediction 522 542 - -
Gma12g02095 549 Gene3D - 194 364 IPR027417 -
Gma12g02095 549 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 200 437 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g02095 Gma-Chr12 41741432 41746900 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g02095 K14537 - gmx:100788649 1095.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g02095 12 41741432 41746900 Gma12g02095 12 41741432 41746900 ECH