Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g02070 ATGAATTATTGGTATGGTACATGCTTATGCATGAGATTATTGAAGAATGGAGATCACAAAAAGAAGTTCCCTCCTAATATTCTTCCTAGTGTTTGTCTCAAGCTTGATCCTGCCAAGGCATATCAAAACCTATACTGCGGCAGAGGAACCCGATGCTATGGAAAGCACATCACATGTCCTGCTGAATGCCCCGACAGTGAAACAAACAATCCTAAGACTAAGGTTTGCCAAATCGATTGCAACAAACCTATTTGCAAGGCAGTCTGCAGAAGTCGCAAGCCAAACTGCAATGCACCAGGATCTGGATGCTATGATCCCCGTTTCATTGGTGGGGATGGTAGAGTCTTCTACTTCCACGGAAAAACCAACGAACACTTCACCTTAGTTTCCGATTCCAACCTTCAGATGAATGCACGCTTCATCGGACACAGGCCTGAAGGAAGAAGCCGAGACTACACATGGATCCAAGCCCTTGGAATCCTCTTCAACTCCAAAACCTTCTCACTTGAGGCCTCCAAGACACCCCAATGGAATGATGAACTTGACCACTTCAAATTCACCTATAACGGGAACCAAGTAGCCCTAGCTGAAGGCTCTCTCTCCACTTGGTACACTGAAGAAAAGGACATAAAGGTGGAAAGAGTGGCAAGCAAGAACGGTGTCATGGTTACACTGAAGGATGTGGCTGAAATATTGGTCAATGTTGTGCCAATAACCAAAGAAGATGACAGAATTCACAACTACCAAGTGCCCTCTGATGACTGTTTTGCTCACTTGGAAGTTCAGTTCAGGTTCTTTGCTTTGTCCCAAAAAGTTGATGGTGTGCTTGGAAGGACTCATAGATTGGATTTTGAGAACCCTGCAAAGCCTGGTGTGGCTATGCCTGTTGTTGGTGGAGAAGACAAGGAACCGATCCTTCTGGTACATAAAAATAGCAACTTTGTCGCATTTTCTATTCGTCTGGCAACTGCAATCTCCATTAATCCGTTTAGTTCAGCTTCAGCACCGAAGCATGGCGGCGTGGACTGTCGCGGCTCGCCGAGCCACCAATATGGTTCAGCTCTCATCACAAACAACGTCTTCACTCCTCCATCGGCGCGGCTTGGCTGGCGCCGCTGGGTGTACTCCTCTATAGCGGTTATAAGTTCTTCACTAGAGGCAAGGGTAAGAATGAAGAGACAGTTGGAGAATCAAACAAGGCTTGAGTTTGCTATAACATCTGCCAAGAAGTTGCCTACTTGA 1242 0.4614 MNYWYGTCLCMRLLKNGDHKKKFPPNILPSVCLKLDPAKAYQNLYCGRGTRCYGKHITCPAECPDSETNNPKTKVCQIDCNKPICKAVCRSRKPNCNAPGSGCYDPRFIGGDGRVFYFHGKTNEHFTLVSDSNLQMNARFIGHRPEGRSRDYTWIQALGILFNSKTFSLEASKTPQWNDELDHFKFTYNGNQVALAEGSLSTWYTEEKDIKVERVASKNGVMVTLKDVAEILVNVVPITKEDDRIHNYQVPSDDCFAHLEVQFRFFALSQKVDGVLGRTHRLDFENPAKPGVAMPVVGGEDKEPILLVHKNSNFVAFSIRLATAISINPFSSASAPKHGGVDCRGSPSHQYGSALITNNVFTPPSARLGWRRWVYSSIAVISSSLEARVRMKRQLENQTRLEFAITSAKKLPT 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g02070 413 Pfam Root cap 262 302 IPR009646 -
Gma12g02070 413 PANTHER CONSTITUENT OF CELL WALL, PUTATIVE-RELATED 39 302 - -
Gma12g02070 413 PANTHER ROOT CAP DOMAIN-CONTAINING PROTEIN 39 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g02070 Gma-Chr12 41414633 41420157 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g02070 - - gmx:100803458 555.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g02070 12 41414633 41420157 Gma12g02070 12 41414633 41420157 ECH