Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g02058 ATGGCCGTCGCCGTCGCCGGCCGCCAGAAGCCGAGCTCCGACGCGAGCCTCTTCACGCTCTGCCCCTTCTGGAGCTCGCGCAACGCTACTCAAAGGTCCACCAAAACGGTGTCGTCCGTCGCCAGGTCGCTGCTCCGTCCGCGCCGGAAACTCCGCCTCGATCCTTCCAGTTACCTCTATTTTCCATATGAACCGGGAAAGCAGGTGAGGAGCGCGGTTCGGTTGAAAAACACTAGCAAGTCTCACGTTGCTTTCAAGTTCCAAACGACGGCGCCAAAGAGTTGTTACATGCGGCCTCCGGGTGGTACTCTTGCTCCGGGAGAAAGTTTGATTGCAACGGTGTTTAAGTTTGTGGAGCAACCTGAAAACAATGAGAAGTTGTCGGATCAGAAGCACAAGGTGAAGTTCAAAATCATGAGTCTCAAAGTGAAGGAAGGAGTGGACTATGTACCTGAGCTGTTTGATGAACAAAAGGATCTAGTGACAATGGAACGAATATTGAGGGTTGTCTTTATAGATCCAGAACGGCAAAGTTCTGTTTTGGAAAAACTGAAAAGACAATTGGCTGAAGCTGATGCCGCAGTTGAAGCTCGGAAGAAGCCTCCCGTGGAGGCAGGTCCTCGGGTTGCTGCCGAAGGGCTTGTAATTGATGAATGGAAAGAGAGAAGGGAGAAGTACTTGGCCCGGCAACAAGTTCAAGCAGTAGATTCAGTGTAA 717 0.5146 MAVAVAGRQKPSSDASLFTLCPFWSSRNATQRSTKTVSSVARSLLRPRRKLRLDPSSYLYFPYEPGKQVRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGTLAPGESLIATVFKFVEQPENNEKLSDQKHKVKFKIMSLKVKEGVDYVPELFDEQKDLVTMERILRVVFIDPERQSSVLEKLKRQLAEADAAVEARKKPPVEAGPRVAAEGLVIDEWKERREKYLARQQVQAVDSV 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g02058 238 Pfam MSP (Major sperm protein) domain 51 158 IPR000535 -
Gma12g02058 238 Gene3D Immunoglobulins 46 176 IPR013783 -
Gma12g02058 238 SUPERFAMILY PapD-like 39 182 IPR008962 -
Gma12g02058 238 ProSiteProfiles Major sperm protein (MSP) domain profile. 50 172 IPR000535 -
Gma12g02058 238 PANTHER VESICLE-ASSOCIATED PROTEIN 4-1 27 237 - -
Gma12g02058 238 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 27 237 IPR016763 GO:0005789
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g02058 Gma-Chr12 41291279 41294719 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g02058 - - gmx:100778320 457.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g02058 12 41291279 41294719 Gma12g02058 12 41291279 41294719 ECH
Gma13g02498 13 39856539 39859702 Gma12g02058 12 41291279 41294719 GST