Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g02040 ATGGCCGCAACCACATTCCCCTCCGACGATATCGACAACCTCCGCTCGCCGTTGCTTCCGCCGAAGAAGAAGCCGCCGACGGAGAAGCTCTGCATCGACGACATGCTGCGGAAGCACTGTGGCGAGTTCGGCCGGTGGCAGCTCAAGCACTTCATCCTCACCAGCCTCGCGTGGGCTCTCGAGGCCTTCCACACCATGGTCATGATCTTCGCGGACCGCGAACCGGACTGGAGATGCGTCTCCGGCTCCGTCTGCGACGACAGCGGAGGCGGCGGTGTCTGCGGCCTCTCGCCGGAGTCGTGGGAGTGGGTCGGCGGCCGCGGTGGCTCCACCGTGTCCGATTGGAGTTTGATTTGCGGAAATAAGTTTAAGGTCGGATTGGTTCAGGCAGTTTTCTTCGCTGGCTGCATGATTGGTGCTGGAATATTTGGCCACCTCTCAGACTCCTCATTAGGAAGGAAAGGCTCTCTCACAGTGGTTTGTGCCATGAACACCATCTTTGGCTTCTTAACAGCTCTGTCCCCTAACTACTGGATCTACGTCCTCCTCCGCCTCCTCACCGGCCTCAGCAGCGGTGGCGTCGGCCTCACCGCCTTTGTTCTTGCTACCGAACCAATTGGCCCAACGAAGCGCGGTGCAGCGGGTATGTCCACCTTCTACTTCTTCTCCGGCGGCATTGCACTTCTCTCCGGCGTCGCCTACATCTTCCAAACATGGCGCTATCTCTACATAGCCTCCTCCATCCCCTCCTTCCTCTACATCATCCTCGTCCTTCCTTTCATATCCGAGTCCCCAAGATGGTACCTCGTTCGCGGCAACGTAACGGAAGCCATGAAACTCATGTCCACCATTGCTTCTTCCAATGGTAAACACCTTCCCGATGGTGTTCTCCTTGCACTTGACGACGAAACATCGTCCACAATAAACCAAGGTTCAGGCTATGACATAACAACAATGATGACTTACAAAAACGAAAACAAGGATGCACTCGTTGGATCCATCATAGACGTGGTTCGTTCCCCCATCACTCGTATGAGGTTGTTCATTGCGGTGGCTCTTAATTTTTTAGGTTCTGTGGTCTACTATGGGCTTAGTTTAAACGTCATGAACCTCGAAACCAACCTCTACTTGAACGTGATGCTGAACTCGGTGGCGGAGATGCCGGCCTTTACGATAACGGCGGTGCTTCTGGACCGGTTCGGACGGAAGCCGTTGACGGTGGCGACAATGTGGTTCAGCGGGTTCTTTTGCTTGATGGGGAGTTTGGTGGGCAATGTTGGGGTGTGGAAGATGGTGAGAATGGTGTGTGGTGTTTTGGGGATATTTGGGATGGCGGGGACTTATAATTTGCTGTTTATTTACACGGCGGAGCTGTTTCCGACGGTGGTGAGGAACGCGGCGCTCGGGTGTACAACTCAGGCGTCGCAAATGGGAGCCATATTGGCGCCGTTTGTGGTCGTTTTGGGAGGGTGGTTGCCGTTTGCGGTGTTTGCAGCATGTGGGATAGTGGGAGGGATGTTTGCGTTTAATCTTCCAGAGACTCTAAACCAACCCCTCTATGATACATTCGGTGGAATGGAAGCTGGACTTGCTTGA 1596 0.5445 MAATTFPSDDIDNLRSPLLPPKKKPPTEKLCIDDMLRKHCGEFGRWQLKHFILTSLAWALEAFHTMVMIFADREPDWRCVSGSVCDDSGGGGVCGLSPESWEWVGGRGGSTVSDWSLICGNKFKVGLVQAVFFAGCMIGAGIFGHLSDSSLGRKGSLTVVCAMNTIFGFLTALSPNYWIYVLLRLLTGLSSGGVGLTAFVLATEPIGPTKRGAAGMSTFYFFSGGIALLSGVAYIFQTWRYLYIASSIPSFLYIILVLPFISESPRWYLVRGNVTEAMKLMSTIASSNGKHLPDGVLLALDDETSSTINQGSGYDITTMMTYKNENKDALVGSIIDVVRSPITRMRLFIAVALNFLGSVVYYGLSLNVMNLETNLYLNVMLNSVAEMPAFTITAVLLDRFGRKPLTVATMWFSGFFCLMGSLVGNVGVWKMVRMVCGVLGIFGMAGTYNLLFIYTAELFPTVVRNAALGCTTQASQMGAILAPFVVVLGGWLPFAVFAACGIVGGMFAFNLPETLNQPLYDTFGGMEAGLA 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g02040 531 PANTHER ORGANIC CATION/CARNITINE TRANSPORTER 4 32 529 - -
Gma12g02040 531 ProSitePatterns Sugar transport proteins signature 2. 186 211 IPR005829 GO:0016021|GO:0022857|GO:0055085
Gma12g02040 531 Gene3D MFS general substrate transporter like domains 92 523 IPR036259 -
Gma12g02040 531 SUPERFAMILY MFS general substrate transporter 121 519 IPR036259 -
Gma12g02040 531 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 32 529 - -
Gma12g02040 531 ProSiteProfiles Major facilitator superfamily (MFS) profile. 50 516 IPR020846 GO:0022857
Gma12g02040 531 Pfam Sugar (and other) transporter 122 520 IPR005828 GO:0016021|GO:0022857|GO:0055085
Gma12g02040 531 ProSitePatterns Sugar transport proteins signature 1. 393 409 IPR005829 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g02040 Gma-Chr12 41010032 41014338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g02040 7 527 Organic Solute Cotransporters AT3G20660 68.441 0.0 706
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g02040 K08202 - gmx:100818415 1016.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g02040 12 41010032 41014338 Gma12g02040 12 41010032 41014338 ECH